PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.660J9
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 264aa    MW: 30629.1 Da    PI: 4.5084
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.660J9genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.77.1e-2274165191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++ HnH+l+p
  Aradu.660J9  74 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCGRWKVSCFVESHNHDLTP 165
                  6****************99998.8888***************9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.8E-2074165IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MSINEDDVKN DSDNDLGDDF DYQPNAEDDA EDDDVDSLDS TSKSEEVCGV KRIADLMVED  60
IWNLEFRTED EACQFYNAYS CWHGFVMRKD DVVRDNQGRI ISRQLVCNKE GWRNMRYLDM  120
DDRSREARSL TRTKCPARLR VKLDYGCGRW KVSCFVESHN HDLTPPQFAH LNTLIDFMHN  180
LDRALKECRN NELIADFKSQ CSEPVMVTSL EVYERSASCY FTRNIFKEIR NEIQRARALN  240
ITVLSTTLDK VEFSVTALGD PAKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.660J9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964940.11e-123protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6S21e-170A0A444Y6S2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1-related sequence 5