PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.54E1H
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 433aa    MW: 46739.9 Da    PI: 7.6975
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.54E1HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.71.9e-16228282357
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                  + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l  ++ ++ 
  Aradu.54E1H 228 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISHKYN 282
                  579*****************************************99988877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-13225280No hitNo description
SMARTSM003388.5E-21226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.519228282IPR004827Basic-leucine zipper domain
PfamPF001705.4E-15229280IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.99E-12230280No hitNo description
PROSITE patternPS000360233248IPR004827Basic-leucine zipper domain
PfamPF124985.4E-41297420IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MERVFSVDEI SEPFILPAAK KMDELTVKST MNRSASEWAF QRFLQEASSA VSATVASPCS  60
SSSSVVEIKQ DLSQNMETKP LQNGTTVAVL PNATASSSSS SVAVDSEDYQ AILKTKLKLA  120
CAAVALTRGS LVKSQVPASF SECTSQATNL SQVASHATLK GSGPSGNDSS KVQNKDAKVP  180
VGIPSLSGVQ NNPAVAIRST TSGSSKDQSD DEEAEEEINM TDNMDPTDAK RVRRMLSNRE  240
SARRSRRRKQ AHLTELETQV SQLRGENSSL LKRLTDISHK YNDAAVDNRV LKADVETLRA  300
KVKMAEETVK RITGLNPMFP AMADLSSIRM SSFDGSPSET STDAAVPVQE DTNRHFFQRT  360
SNNPMSSHDH GVNNWLADVS SDENVQHNAT ASPGGNKMDR TSSLPRVASL EHLQKRIRSN  420
TASSAPVSNG KHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242249RRSRRRKQ
2244249SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.54E1H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968489.10.0light-inducible protein CPRF2
SwissprotQ990901e-118CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A371EBT11e-160A0A371EBT1_MUCPR; Light-inducible protein CPRF2
STRINGGLYMA10G30410.11e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-67bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]