PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.45U0D
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 317aa    MW: 34404 Da    PI: 8.1863
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.45U0DgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.24e-052052431255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Aradu.45U0D 205 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 243
                  7788899*********998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.719193242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.83E-5203247No hitNo description
SuperFamilySSF474595.23E-11203256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-9207250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MLNSHTPPPP SSTVEFSTHD DDKLLLKTFF SAQDFYSNNN TTFCEVPSSS RRNFSHIYPT  60
INISNNINNH SSPSPSSSSN NMTSHSLDLP AFMTTTTHGG GAAAHQQVDL GLATFSDNHL  120
SFHLDHHHSH HHRPTHASSP PCSNSTTSTT ANNNSHPSQY FVSNGTVDTK RPCTSIMDTK  180
ASQSLTASKK SRSESRPSCP PFKVRKEKLG DRIAALQQLV APFGKTDTAS VLMEAIGYIK  240
FLQSQVETLS VPYMKPTQNQ TNTRMMQGVS AIGGGNGEPK QDLRSRGLCL VPLSCMSYIA  300
GDASNDTWQQ SNFGGAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.45U0D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933800.10.0transcription factor bHLH110-like isoform X1
TrEMBLA0A445BR310.0A0A445BR31_ARAHY; Uncharacterized protein
STRINGVIT_18s0001g12970.t012e-73(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40453254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-52bHLH family protein