PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.456GX | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 344aa MW: 38890.2 Da PI: 5.4359 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 57.7 | 2.4e-18 | 213 | 254 | 18 | 59 |
-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 18 sefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 s++ rsYYrCtsa+C+vkk+vers +dp+vv++tYeg+H h+ Aradu.456GX 213 SKYFRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHP 254 7899*************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 18.682 | 203 | 256 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-12 | 208 | 255 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-12 | 209 | 254 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.1E-16 | 212 | 256 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.66E-14 | 213 | 256 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MEKDNMDLKK TEDAVAFGSS NGYYNNPLLL SSAFDFSCEV EKSSFMELLG VQDYYNNSGA 60 VLDLPQLSKA TVLPFTTVNA SCDDTAKECS EVLNQKHQPA TPNSSSISSA SSEAVNDEHN 120 KIVEQDDDDS EEDEEEEEQL KETKKEWLGR FYYKMRFDGP FDWALKVEGK EDKAEETERT 180 EIRVHDEKRG RSSGRRLQME KVRSKGCQKQ PLSKYFRSYY RCTSASCNVK KRVERSFTDP 240 SVVVTTYEGQ HIHPSPVMPR SAIAGVGSPM IPPAVSTPNL GPLMPGNYMS HYHQHRHHHQ 300 QLLVNTLFSL GIPYNNSNNI DNSSFSQDNG LLQDIVPSHM LKEK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.456GX |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KM587697 | 4e-89 | KM587697.1 Glycine max clone GmWRKY3 WRKY mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015939429.1 | 1e-150 | probable WRKY transcription factor 23 | ||||
TrEMBL | A0A444XHZ1 | 1e-145 | A0A444XHZ1_ARAHY; WRKY transcription factor | ||||
STRING | AES61632 | 5e-71 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1002 | 34 | 114 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 2e-19 | WRKY DNA-binding protein 48 |