PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.455QS | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 287aa MW: 33016.6 Da PI: 4.7647 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.1 | 2.4e-30 | 57 | 115 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+ Aradu.455QS 57 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMIIITYTSTHNHP 115 699***********************9988****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-31 | 49 | 117 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.099 | 51 | 117 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-26 | 52 | 117 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.7E-36 | 56 | 116 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.5E-25 | 58 | 115 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence Send to blast |
MDANVSTKLE SEETSEELKS SETQASKKRK MVEKTVVRVR IGEGNNISRL KNEGLPSDFW 60 SWRKYGQKPI KGSPYPRGYY RCSTSKGCSA KKQVERCRTD ASMIIITYTS THNHPSPDAI 120 ISTQNLSQKP KEQEGGETTE EELSKVEEQE QEHEHEHEHE QVEEEHSTDH EKPSTTTVSM 180 ATADEKSFHY LQSPISSHED IVVVDQEDPF KLSSEKSHER IDLLLEEEEP LCYAQIKNLT 240 TKKSDELDFF DELEELPMSS PFLHFTRSIL SDERIPVFPX XXXCIYL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-21 | 57 | 117 | 17 | 79 | Disease resistance protein RRS1 |
5w3x_D | 2e-21 | 57 | 117 | 17 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.455QS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU019577 | 1e-73 | EU019577.1 Glycine max WRKY41 (WRKY41) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015968885.1 | 0.0 | probable WRKY transcription factor 65 | ||||
Refseq | XP_025603979.1 | 0.0 | probable WRKY transcription factor 65 isoform X1 | ||||
TrEMBL | A0A445CMQ7 | 0.0 | A0A445CMQ7_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA19G40470.1 | 1e-121 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9708 | 32 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-36 | WRKY DNA-binding protein 35 |