PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco022043.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 346aa    MW: 39288.8 Da    PI: 5.1134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco022043.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.54.7e-3181511128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksg 81 
                  lp+G++F+P+d el+ e+L+ kv + +      ++++   ++e  +i++++P++Lp  +k++ +++yfF++ +++yatg rk+r+          ++ 
  Aco022043.1   8 LPAGVKFDPSDLELL-EHLEGKVGSGNskphmfIDEFIPtLEENeGICYTHPENLP-GIKNDGSNIYFFHRISNAYATGCRKRRKisrnnnsssEEHV 103
                  799************.99*****99886766443332222444447**********.7888999********************86788777766689 PP

          NAM  82 yWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                  +W++tgk+k++l+ +g  +g kk++v+ykg  r  k+ k++Wvmh+y+l
  Aco022043.1 104 RWHKTGKTKSILE-NGVRKGWKKIMVLYKGskRGCKPDKANWVMHQYHL 151
                  9************.999***********8733555788*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-353170IPR003441NAC domain
PROSITE profilePS5100530.1658170IPR003441NAC domain
PfamPF023653.4E-149151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
VTLEWPGLPA GVKFDPSDLE LLEHLEGKVG SGNSKPHMFI DEFIPTLEEN EGICYTHPEN  60
LPGIKNDGSN IYFFHRISNA YATGCRKRRK ISRNNNSSSE EHVRWHKTGK TKSILENGVR  120
KGWKKIMVLY KGSKRGCKPD KANWVMHQYH LGAEEDEKDG ELVVSKIFYQ LHTKQTERLD  180
MDSVEEESNV FALRVSPRTP KTNTPQPPRS KKKNQGGVDE DDVRQLQDEE EQYREEHAAP  240
ILDLKKKGES AAWWSCESQA VEDPRSLDES LLCHEVLDSF PLEASLHFDY PNLDRAMNGT  300
LDPYAGTAFG SFDLDSIEIG TPPDFQLADF QFGSQESITS WLDRF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020111355.10.0SUPPRESSOR OF GAMMA RESPONSE 1 isoform X1
TrEMBLA0A199UED30.0A0A199UED3_ANACO; NAC domain-containing protein 8 (Fragment)
STRINGXP_008812203.11e-161(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.18e-67NAC family protein