PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco013645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | GeBP | ||||||||
Protein Properties | Length: 157aa MW: 17933.4 Da PI: 10.7623 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 55.2 | 1.9e-17 | 2 | 98 | 14 | 97 |
DUF573 14 vlLqGlidfkaktgk........spsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqkifelskkiWg 97 ++L G+++f +++g+ + ++d+ f+e ++ ++ ++ ++ ql +K+rrLK+K++ ++ + +f+++hd+ +fel++kiW Aco013645.1 2 AILEGFLEFVTERGTptrapdhhHHHHDTAPFFERIRPRLRrADLNRAQLADKLRRLKRKYRAAASRlaaaPSAAAAAAFRTPHDRATFELARKIWS 98 69************9999888755667**********9995389**********************9766545677889*****************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.7E-17 | 2 | 98 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MAILEGFLEF VTERGTPTRA PDHHHHHHDT APFFERIRPR LRRADLNRAQ LADKLRRLKR 60 KYRAAASRLA AAPSAAAAAA FRTPHDRATF ELARKIWSPA TPAPEPEEGR KGMEEKWREQ 120 QILELEVLLK RAELLHEHFS AKLEEMRSTT TTTSSN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020101254.1 | 1e-108 | probable transcription factor At4g00390 | ||||
TrEMBL | A0A199UHK4 | 2e-66 | A0A199UHK4_ANACO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Link Out ? help Back to Top | |
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Phytozome | Aco013645.1 |