PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco012809.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family C2H2
Protein Properties Length: 868aa    MW: 92078.4 Da    PI: 6.7057
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco012809.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.00185976219
                 EETTTTEEESSHHHHHHH CS
      zf-C2H2  2 kCpdCgksFsrksnLkrH 19
                 +C++Cgk F ++ ++  H
  Aco012809.1 59 VCENCGKEFVSWKSFLEH 76
                 6**************999 PP
2zf-C2H211.40.001745767123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C+ C+k+F++   L  H  +H
  Aco012809.1 745 YQCGTCKKTFRSYQALGGHRASH 767
                  9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003552505878IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.16E-7214237No hitNo description
PfamPF139126.5E-9215239IPR007087Zinc finger, C2H2
SMARTSM003550.13215237IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.221215242IPR007087Zinc finger, C2H2
PROSITE patternPS000280217237IPR007087Zinc finger, C2H2
SuperFamilySSF576671.16E-7309336No hitNo description
PfamPF139122.8E-12313337IPR007087Zinc finger, C2H2
SMARTSM003550.46314336IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.349314336IPR007087Zinc finger, C2H2
PROSITE patternPS000280316336IPR007087Zinc finger, C2H2
SMARTSM00355110499518IPR015880Zinc finger, C2H2-like
PfamPF139124.3E-4500518IPR007087Zinc finger, C2H2
PfamPF139125.9E-10744769IPR007087Zinc finger, C2H2
SuperFamilySSF576671.46E-6744819No hitNo description
PROSITE profilePS501579.515745767IPR007087Zinc finger, C2H2
SMARTSM003550.085745767IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280747767IPR007087Zinc finger, C2H2
PfamPF139124.7E-8796821IPR007087Zinc finger, C2H2
SMARTSM003550.048797819IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.66797824IPR007087Zinc finger, C2H2
PROSITE patternPS000280799819IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 868 aa     Download sequence    Send to blast
MRAHGINDEA SGGNDLDDDP SACGGNNADH WDAAANPSVG HKRMYALRTN PNRLKSCRVC  60
ENCGKEFVSW KSFLEHGKCS SDDEVEDSLP SSPPSDAEDD LVAAHRGYAA WSKGKRSRRA  120
KNSAPAMQLV CPSSEEEDLA NCLVMLSAAR VDPVVVVDTD QESCASASKD EDRARPQLPT  180
PPHPISFFAP PHEKLKSPVP PTATATATTV PRGLFECKAC KKVFTSHQAL GGHRASHKKV  240
KGCFAAKLDE LDDARPHDDD HPAAVARDSA AAAAAETDSA VAGMAMAIVP FSNPPPLAAV  300
APPPSPLKKK SKVHECSICH RVFTSGQALG GHKRCHWLTS NSPSDSTAIA KLHALAGPDH  360
AVNHHHHHLT LRPMFEANSG EPLDLNLPAP ADEAAGGRHA DIGSPLRLDV PATIYLQSWI  420
DHSSASNKVK PTTSSKNNNT TTTNNNNNNT NNKSEGFNVN NNNNNNNSVD DEVDSNVKMA  480
KLSDLKDINM GGESSPWLQL CSRRFSNGRA LGGHMRSHVV GGGGAPAAKT QLSSASSAST  540
SVADDPEEDE EEDEGRYIHG GLGYVLRENP RKSFRLVDPQ FSSSFASAAA AAAADAGSCS  600
VVQDRESDNE SPRAAAPAHH RRRSKRPRSR APPPLHDVEP ASSVSDATPE EDVALSLMML  660
SRDSWTNPKS KSETEQSFNH YCCYYYSSSY YSYKEEEEEE EEEEGGGGGG GGLRQSDGDD  720
CGERARRGAS RAVRSRAAPK SRSRYQCGTC KKTFRSYQAL GGHRASHKKG GVAGGRGCCF  780
PPPPPPEPNA GGARDAHACP FCSRVFASAQ ALGGHKRAHP AAAAAAAVPP PPPSAGSFGV  840
IDLNLPAPAD DDFELSAVSD ADFGPFK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020085328.10.0uncharacterized protein LOC109708129
TrEMBLA0A199UTC60.0A0A199UTC6_ANACO; Zinc finger protein ZAT2
STRINGXP_008796146.11e-167(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35243262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.19e-21C2H2-like zinc finger protein