PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco000392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | BES1 | ||||||||
Protein Properties | Length: 349aa MW: 36774.8 Da PI: 8.3125 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 206.1 | 9.9e-64 | 2 | 148 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslqss 97 ++++r ptw+ErEnnkrRERrRRaiaakiyaGLR +Gny+lpk++DnneVlkALc+eAGw+ve+DGttyr g+kp+ + +++ag as sp+ s+q Aco000392.1 2 TSGTRVPTWRERENNKRRERRRRAIAAKIYAGLRTYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRTGCKPPpSPTDVAGGAASPSPCCSYQ-- 97 5899************************************************************************999*****************.. PP DUF822 98 lkssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsss 149 +sp++sy++sp+sssfpsp+s+ i+ ++ +sl+p+l++ls++s+s Aco000392.1 98 ------PSPIASYNPSPASSSFPSPKSSPYITQPNSfpdvnNSLIPWLKTLSSSSAS 148 ......*************************9998899**9*********9986655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.9E-65 | 3 | 143 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MTSGTRVPTW RERENNKRRE RRRRAIAAKI YAGLRTYGNY NLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RTGCKPPPSP TDVAGGAASP SPCCSYQPSP IASYNPSPAS SSFPSPKSSP 120 YITQPNSFPD VNNSLIPWLK TLSSSSASSS AASFPPLPHL YIPGGSISAP VTPPLSSPTA 180 RTPRMKTDWD ERHAQPSWAG GANYTSVPNS TPSSPGRSVF PDPAWFAGFQ ISSAGPSSPT 240 RSLVASNPFG LFKEAIVASA GVSRGASRMC TPGQSGTCSP VMPGAPSCAD VLMPDIRVSD 300 EFAFGSSSSD TNRMAGPVKA WEGERIHEEC GSDDLELTLG NSSTRADA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-24 | 6 | 85 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-24 | 6 | 85 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-24 | 6 | 85 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-24 | 6 | 85 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK101229 | 2e-63 | AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020100590.1 | 0.0 | protein BZR1 homolog 3-like | ||||
Swissprot | Q5Z9E5 | 1e-135 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | A0A199W013 | 0.0 | A0A199W013_ANACO; Protein BZR 3 | ||||
STRING | BRADI1G38180.1 | 1e-136 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-93 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Aco000392.1 |
Publications ? help Back to Top | |||
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