PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn382341
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family GeBP
Protein Properties Length: 402aa    MW: 45257.7 Da    PI: 4.5621
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn382341genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573133.11e-41299393397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 + rlwseeDeiv+L+G+id+++k+g++p +d+ afy+f+kks+ ++vs++ql++K+rrLKkK++++v+k k+g++p+fsk+h++k+felskkiW+
  Achn382341 299 IPRLWSEEDEIVVLKGMIDYQSKKGADPNADMGAFYDFIKKSLRVDVSRNQLMDKVRRLKKKYRTNVEKGKKGEDPVFSKPHEHKSFELSKKIWD 393
                 579*******************************************************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.6E-36300393IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MSSTQRSEGM NAYFDGYIHS KTTLKQFVEQ YENALASKVE SENLEDVKSW STYIPCITKG  60
ELEKQFQSVY THAKVKEFQE QFVGKLDCLC SKTKEGDIVS EYEVKQSITF GEREEAYTKE  120
VSFIVDFNAK TNEAHCNCQL FEFRGMRAPM EDPPSASSSS EDESEEISDK EDGRAQEQSK  180
ENPESEEEES SEDEEDDDEE ENKMSSSVQT PNPTETPQPP SDKDSDSETL PSPTASDFTV  240
KPILSKPMAD STNKANKPTS KAPNSGAKRP AESEKSGEES QRKKVKVSNG DAEEKKNPIP  300
RLWSEEDEIV VLKGMIDYQS KKGADPNADM GAFYDFIKKS LRVDVSRNQL MDKVRRLKKK  360
YRTNVEKGKK GEDPVFSKPH EHKSFELSKK IWDGGDNNAV D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QW891e-176A0A2R6QW89_ACTCH; STOREKEEPER protein
STRINGXP_010109556.11e-56(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.11e-31DNA-binding storekeeper protein-related transcriptional regulator