PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn331511
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 285aa    MW: 30598.2 Da    PI: 5.6349
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn331511genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_158.11.9e-18176238163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 +++lkr rrkq NRe+ArrsR+RK+ae+eeL e+ ++L+ eN aLk+e+++l++ ++kl+ e+
  Achn331511 176 QRQLKRVRRKQANRESARRSRLRKQAETEELMERYETLKVENIALKSEMNQLTEGSEKLRVEN 238
                 689********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.2E-171879IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.7E-14175235No hitNo description
PfamPF001705.8E-17176238IPR004827Basic-leucine zipper domain
SMARTSM003387.7E-16176240IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.047178241IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10179234No hitNo description
CDDcd147022.93E-19181229No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGSSEDVKSP KSAKVSPSKQ AYYGPGVPVP QSYLNSAVVA GHVPHPHLWS TPQTLMPPYG  60
LPYSTIYSPG VVYAHPAVPP DDSQETTVFS AAMMSCPAVT VIQVATPVST QQISNSSDIT  120
DQGLRKKLKS VDGVAMCAVK DNVDVDGEGS VHGASQSAEG GIGASSNATD CNYGDQRQLK  180
RVRRKQANRE SARRSRLRKQ AETEELMERY ETLKVENIAL KSEMNQLTEG SEKLRVENAA  240
LMEKLSVADV THHGEMVLDE IEPDLAQPNC SEDGFTLNKP GSVN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129LRKKLKS
2192198RRSRLRK
3192199RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PHV30.0A0A2R6PHV3_ACTCH; G-box-binding factor like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1889723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.22e-46G-box binding factor 3