PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn284361
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 360aa    MW: 40750.9 Da    PI: 6.9725
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn284361genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-1076106434
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                  k++rr+++NReAAr+sR+RKka++++Le+ 
  Achn284361  76 EKVQRRLAQNREAARKSRLRKKAYVQQLETY 106
                 699*************************983 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.7E-869122No hitNo description
SMARTSM003382.0E-873155IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.11775117IPR004827Basic-leucine zipper domain
PfamPF001701.3E-777110IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-777117No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141443.1E-28165237IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MSSTSTQFAP SARMGMYDAI HQVSMWESAF RGDIIPNSDA SVPVQINARL DNKAEYASYD  60
SLDPSENHQE ANKMSEKVQR RLAQNREAAR KSRLRKKAYV QQLETYRLKL AQLEQELARA  120
RQQGVFIGGA INTGHLGFSG PVNTGIATFE MEYAHWVEEQ QRHNCELRKV LQVHTSDIEL  180
RILVENGLNH YYNLFRMKAE AAKADIFYLI SGTWRTSAER FFLWLGGFRP SELLNVMLRS  240
QFDSVLMPQI EPFTDQQQMA VSNLMQSSQQ AEDALSQGID RLQQTLSQNI ASDPTDVGNY  300
GSPMGSAIEK LDALENFVNQ ADHLRQQALQ QLSRILTIRQ TARGLLALGE YFQRLRALS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002285820.10.0PREDICTED: transcription factor TGA4
RefseqXP_010664271.10.0PREDICTED: transcription factor TGA4
RefseqXP_010664272.10.0PREDICTED: transcription factor TGA4
RefseqXP_010664273.10.0PREDICTED: transcription factor TGA4
RefseqXP_019072140.10.0PREDICTED: transcription factor TGA4
SwissprotQ392371e-144TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A2R6QYH20.0A0A2R6QYH2_ACTCH; Transcription factor like
STRINGVIT_18s0001g04470.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-147bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]