PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn269791
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Trihelix
Protein Properties Length: 435aa    MW: 47611.8 Da    PI: 9.5347
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn269791genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.64.4e-2017106186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++e+laLiea+r+++ +lrrg l+ ++W++v++++     + g  +++ qC++k+e+l++ry+ +k+++ +   +  s++ +fd+++
  Achn269791  17 CWTQDETLALIEAYRDRWLALRRGYLRTADWDAVAEAVavrcPAAGAAKTSAQCRHKMEKLRQRYRTEKQRSLSFPGRFFSSWFFFDNMD 106
                 8***********************************9999999******************************99889999******998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-2016108No hitNo description
PROSITE profilePS500906.3771878IPR017877Myb-like domain
SMARTSM005954.3E-625113IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MSTTPAEKPP RKFPAPCWTQ DETLALIEAY RDRWLALRRG YLRTADWDAV AEAVAVRCPA  60
AGAAKTSAQC RHKMEKLRQR YRTEKQRSLS FPGRFFSSWF FFDNMDSLGI GSTTAVGSNQ  120
ESANRTVDSI GGLLSIKGLS EHDLVDSVLR TKNSRPNIEG GVDLGSGFRG NQNLVTIGFR  180
AKNSGKMDGN SRVLNGNSSY VDEGSDDDVG DDTDFGGGFR DRNPIDGKLV PPLIRAKKLE  240
KIHGGFGSNF DSNHDDGDGG GDDDDGGFFV RNPIDPHLVP PGYRGKKFGK VDGKLNPNFV  300
CADGSYAVPT GFRTKGFGKN LGYSYPNLDS RFSNGFASGV GLGLGKKNGD RGVKRERGGI  360
GEMVSSIKLL GDGFVMMEKM KMEMAREIEK MRMEMEMKRN ELILESQRQI VDAFVTVLME  420
KKKKKASPTV LPES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028116102.10.0protein FIP2-like
TrEMBLA0A2R6QNT20.0A0A2R6QNT2_ACTCH; Trihelix transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127741617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.13e-22Trihelix family protein