PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn262621 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 324aa MW: 37032.1 Da PI: 8.0725 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.3 | 2.6e-52 | 42 | 166 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL+++++++++++ +i+e+d+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + ++ Achn262621 42 LPPGFRFHPTDEELVMHYLCRRCASQHISV-PIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGHGYWKATGADKPIGH--PKA 137 79****************************.88***************6555679*************************************99..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkgekt+W+mheyrl Achn262621 138 VGIKKALVFYAGKAPKGEKTNWIMHEYRL 166 ***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-62 | 35 | 193 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.161 | 42 | 193 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.5E-27 | 43 | 166 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MVCHVTNVLE SSCKLKFQFF KPPYSRSRER SREREMTADL QLPPGFRFHP TDEELVMHYL 60 CRRCASQHIS VPIIAEIDLY KYDPWDLPGL ALYGEKEWYF FSPRDRKYPN GSRPNRAAGH 120 GYWKATGADK PIGHPKAVGI KKALVFYAGK APKGEKTNWI MHEYRLADVD RSARKKSNSL 180 RLDDWVLCRI YNKKGSIEKQ NVVAYQQQPI DSSEMYEQKP DILSHGGALP PPPPPPRESS 240 TAAGMFSDLL HLDKSDSVPR LHTDSSCSEH VLSPEVTCER EVQSEPTWAK SSLDFPFHYV 300 DATIDSTFTS PLQDMFMYLQ KPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-84 | 32 | 199 | 5 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028087763.1 | 1e-170 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-140 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2R6QYP1 | 0.0 | A0A2R6QYP1_ACTCH; NAC domain-containing protein | ||||
STRING | XP_010095416.1 | 1e-152 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-139 | NAC family protein |