PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn239781
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 308aa    MW: 34890.4 Da    PI: 5.337
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn239781genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.95.7e-2561312128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlskk 96 
                 p Gf+F+P+d+el+ + + +kv+g++l+++e  i+e d++ k ePw++    +++ek+ yfF+k +kk +   g++  r++ +g+Wk +  + ++++++
  Achn239781   6 PYGFKFSPEDHELI-YIIYRKVNGNSLPVDEGlIEERDLFgKEEPWEIF--GRGTEKSRYFFVKLKKKGKsaDGSNFVRTVGKGTWKGQDGQIPIKDQQ 101
                 89************.889********99987779***9883569****6..34567889***9988876633689999********************* PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 g+++g kk Lv+  g+ p+ ++ +W+m+ey+l
  Achn239781 102 GRTIGFKKNLVYK-GKGPN-TNGRWLMKEYHL 131
                 ***********96.99999.799********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-273153IPR003441NAC domain
PROSITE profilePS5100529.7155153IPR003441NAC domain
PfamPF023652.1E-156131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MALSIPYGFK FSPEDHELIY IIYRKVNGNS LPVDEGLIEE RDLFGKEEPW EIFGRGTEKS  60
RYFFVKLKKK GKSADGSNFV RTVGKGTWKG QDGQIPIKDQ QGRTIGFKKN LVYKGKGPNT  120
NGRWLMKEYH LHGVSLQPPP KLNDYVLCRI RKKDDGKKQN VPFDMEAHSR CQRIGGNQDG  180
EGVNSVSCAE NSIIGRKRPR IEYMMDYELP NLSVADAAIM VESNDKERDQ RMDHLGAENC  240
IPASSEGISK CFTQDDDAEF FRGLNPIFEK FSDEGFGGML WTESEAEQMG DPQESLQDLE  300
INCEMFC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-17315513170Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16672LKKKGKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PW300.0A0A2R6PW30_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-20NAC family protein