PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn238591
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 308aa    MW: 34901.6 Da    PI: 7.0121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn238591genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.73.7e-2661312128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlskk 96 
                 p Gf+F+P+d+el+ + L +kv+g++l+++e  i+e d++ k ePw++    +++ek  yfF+k +kk +   g++  r++ +g+Wk +  + ++++++
  Achn238591   6 PYGFKFSPEDHELI-YILYRKVNGNSLPVDEGlIEERDLFgKEEPWEIF--GRGTEKTRYFFVKLKKKGKsaDGSNFVRTVGKGTWKGQDGQIPIKDQQ 101
                 89************.99*********99987779***9883569****6..33466788***9988876633689999********************* PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 g+++g kk Lv+  g+ p+ +k +W+m+ey+l
  Achn238591 102 GRTIGFKKNLVYK-GKGPN-TKGRWLMKEYHL 131
                 ***********96.99999.7**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-283153IPR003441NAC domain
PROSITE profilePS5100530.2555153IPR003441NAC domain
PfamPF023652.5E-166131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MALSIPYGFK FSPEDHELIY ILYRKVNGNS LPVDEGLIEE RDLFGKEEPW EIFGRGTEKT  60
RYFFVKLKKK GKSADGSNFV RTVGKGTWKG QDGQIPIKDQ QGRTIGFKKN LVYKGKGPNT  120
KGRWLMKEYH LHGVSLQPPP KLNDYVLCRI RKKDDGKKQN VPFDMEAHSR CQRIGGNQDG  180
EGVSSMSCAE NSILGRKRPR IEYMMDYELP NLSVADATIM VESTDKERDH CMDRLGAENC  240
VSALSEGISK SFKQDDDAEF LRGLSPIFKK FSDEGFGARL WTESEAEQMG DPQEALRDLE  300
INSEMFC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-18315513170Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16672LKKKGKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PW300.0A0A2R6PW30_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-20NAC family protein