PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Achn184611 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 376aa MW: 41448.8 Da PI: 7.9199 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54 | 3.7e-17 | 240 | 302 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++ k errkq NRe+A+rsR+RK+ae+eeL e+ ++L+ eN aLk+e+++lk+ ++kl+ e+ Achn184611 240 QRQQKQERRKQANRESAKRSRLRKQAETEELMERYETLKVENIALKSEMNQLKEGSEKLRVES 302 5789*******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.3E-15 | 82 | 143 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 1.9E-6 | 185 | 259 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 239 | 299 | No hit | No description |
Pfam | PF00170 | 1.5E-15 | 240 | 301 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.9E-12 | 240 | 304 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.013 | 242 | 305 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.31E-9 | 244 | 298 | No hit | No description |
CDD | cd14702 | 7.36E-17 | 245 | 293 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 247 | 262 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 376 aa Download sequence Send to blast |
MVFNCRPPVV ITGEVTLCHF KSRIGINSVK DLQSNLSDSP KHKGKSGVYY ELLQQFTSLF 60 WNSTMGSSED MKSPKSAKVS PSNQAYYGPG VPVPPSYLNP AVMAGHVPHP HLWSPPQTLM 120 PSYGVPYSTI YSPGVVYAHP AVPLDDSQET TLFSANMMSY PAVTVIQVAA PVSTQQLSNS 180 SDITDQGLRK KLKSVDGVAM RDVKNNVDVD GEGLVHEASQ SAECGIRASS NASDCNYGDQ 240 RQQKQERRKQ ANRESAKRSR LRKQAETEEL MERYETLKVE NIALKSEMNQ LKEGSEKLRV 300 ESAALMEKLN VADVTHKEEM VLDEIEPDLA QPNCGEDGVQ LNKSGSHFGI KERNPSSNPK 360 FRTRDKLVAY RKGMA* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 187 | 193 | LRKKLKS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6PHV3 | 1e-173 | A0A2R6PHV3_ACTCH; G-box-binding factor like |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18897 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46270.2 | 7e-24 | G-box binding factor 3 |