PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn156891 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | FAR1 | ||||||||
Protein Properties | Length: 149aa MW: 17235.3 Da PI: 4.7793 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 35.5 | 3.2e-11 | 94 | 135 | 1 | 43 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 +fYn+YA++vGFsvr+sk++k kr g ++r f+Cs +g+r + Achn156891 94 EFYNAYAYKVGFSVRRSKEYKDKR-GMLVTRIFCCSYKGNRGK 135 6********************955.559999********9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.3E-7 | 94 | 133 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MEIEINSSSP ISCEVLDIDG NYARDDCNSR RKLEFKDDDD FFNSNVPIEE ESEQHVLQNS 60 LDTLGDIKLV HSQIPNEAIP NIDMKFKTEE EAYEFYNAYA YKVGFSVRRS KEYKDKRGML 120 VTRIFCCSYK GNRGKINEII YTHLTALR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3021 | 17 | 40 |