PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Achn062651 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 39879.1 Da PI: 5.5988 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.4 | 3.5e-09 | 150 | 200 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 kr++r NR +A rs +RK +i eLe+kv +L++e ++L +l + + Achn062651 150 KRAKRILANRQSAARSKERKARYISELERKVLTLQTEATTLSAQLTMFQRD 200 9****************************************9998876655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-15 | 146 | 210 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.519 | 148 | 211 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.32E-10 | 150 | 201 | No hit | No description |
Pfam | PF00170 | 9.3E-8 | 150 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.7E-10 | 150 | 204 | No hit | No description |
CDD | cd14703 | 5.44E-22 | 151 | 200 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 364 aa Download sequence Send to blast |
MQDPSNSNTN AQKPPMTSFG NPTAAFRSAH HRRAHSEVNF RMPDDLDLGP DPFGGPPGSF 60 DEIGSEDDFF STYMDVEKLG SGSSDVGDCR IDNARGGGEP EEAGDGEKSV RPRHRHSNSV 120 DGSVFMTEAI EAKKAMAPDK LAELWSIDPK RAKRILANRQ SAARSKERKA RYISELERKV 180 LTLQTEATTL SAQLTMFQRD TTGLSNENTE LKLRLQAMEQ QAQLRDALNE ALKHEVARLK 240 VATGEMASPS DAYNFGMPHL LYTQSSFYSQ QPQNGTSDAQ QIQVPQFHPL QSNMINHQHS 300 FLVASQSQSL SEMLQQDSLG RLQGLNINAR GSHLVKSEEP SISASESSSL SVVLTGSFSD 360 IPD* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00303 | DAP | Transfer from AT2G40620 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_028084122.1 | 1e-172 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 1e-116 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A2R6PLP4 | 0.0 | A0A2R6PLP4_ACTCH; Transcription factor RF2b like | ||||
STRING | VIT_13s0067g02900.t01 | 1e-166 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3425 | 23 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40620.1 | 7e-88 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|