PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn059641
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 404aa    MW: 44608.4 Da    PI: 4.8561
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn059641genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.11.1e-163814422128
         NAM  22 kvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116
                 kv+g++l+++e  i+e +++ k ePw++    +++ek  yfF+k +kk +   g++  r++ +g+Wk +  + ++++++g+++g kk Lv+  g+ ++ 
  Achn059641  38 KVNGNNLPVDEDlIEERELFgKEEPWEIF--GRETEKTRYFFVKMKKKGKsaDGSNFVRTVGKGTWKGQDGQIHIKDQQGRTIGFKKNLVYK-GKGSN- 132
                 778888777555599998762669****6..33456788***9988876633689999*********99999999999************98.55555. PP

         NAM 117 ektdWvmheyrl 128
                 ++ +W+m+ey+l
  Achn059641 133 NNGRWLMKEYHL 144
                 589********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.63217166IPR003441NAC domain
SuperFamilySSF1019413.4E-1936166IPR003441NAC domain
PfamPF023658.7E-1045144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MAVPVLSRIQ DAHQMALPVP SVPSLVQASH QMTLSVPKVN GNNLPVDEDL IEERELFGKE  60
EPWEIFGRET EKTRYFFVKM KKKGKSADGS NFVRTVGKGT WKGQDGQIHI KDQQGRTIGF  120
KKNLVYKGKG SNNNGRWLMK EYHLHGVSLQ PLPKLNDYVL CRIKKKDDGK KQNVSKRTEE  180
AIGGNQDGEV FGSVSCAENS IIGRKRPRPN LSVADAAMPN LSAADAADAP IMVELIAQEE  240
PRIDKEGDQR MDRLGFGTEE AIGGNQDGVV FGSMSCAENP IIGRKRPRPN LSVADVAMPN  300
LSVADAPIMV ESIAQEEPRI DKEGDQRMDR LGDENCVPAL SEGISKSFTQ DDYAEIFGGL  360
CPIIEKFSDE DFGGRLWTES EAEQMGDISQ FLQDFEINSD MFC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1284288KRPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PVU00.0A0A2R6PVU0_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-11NAC family protein