PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn056701 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 189aa MW: 21293.3 Da PI: 7.7988 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.4 | 8.2e-06 | 4 | 23 | 1 | 20 |
CHHHHHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsaf 20 +r++h ++Er+RR+++N+ + Achn056701 4 QRMTHIAVERNRRKQMNEYL 23 79***************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.75E-6 | 2 | 46 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.5E-4 | 2 | 23 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.85E-10 | 2 | 57 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MENQRMTHIA VERNRRKQMN EYLSGDQASI IGGAINYVKE LEQKLHFLGG NKHVNNQKFE 60 AGSSTSSSSL PFDDYFTFPQ YTTSRDNSIM VSENHELAMA DIEVTMVESH ANLKIRSKRR 120 PKQLLKMVSG LQSLRLTILH LNVTTVHQIV LYSLSLKVED DCKLSSVDEI ATAVNQMLGR 180 IQQEAVLI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 15 | RMTHIAVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028059913.1 | 7e-96 | transcription factor bHLH94-like | ||||
Swissprot | Q9C7T4 | 3e-66 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A2R6RBK7 | 1e-117 | A0A2R6RBK7_ACTCH; Transcription factor bHLH94 like (Fragment) | ||||
STRING | VIT_14s0128g00110.t01 | 2e-87 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13227 | 15 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-65 | bHLH family protein |
Publications ? help Back to Top | |||
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