PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn054841 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 343aa MW: 38114.3 Da PI: 6.6524 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.9 | 1e-08 | 150 | 201 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r NR +A+rs +RK ++ eLe+kv +L++e ++L +l+ + Achn054841 150 RRAKRILANRQSASRSKERKARYMSELERKVLNLQTEATTLSAQLSLFQRDT 201 699***************************************9998776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-15 | 146 | 210 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.553 | 148 | 211 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-7 | 150 | 200 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-9 | 150 | 204 | No hit | No description |
SuperFamily | SSF57959 | 7.23E-10 | 150 | 201 | No hit | No description |
CDD | cd14703 | 7.61E-20 | 151 | 200 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MQDPSKSNPN SSNQNVQKLP TMTSATTSFG NVFRSGQHRR AHSEVNFRLP EDLDLASDPF 60 CWPLSGSFDE IGSEDDLLCT YMDMEKFGSG TAPDCGGGVA AESSEGERID RPRHRHSNSV 120 DGSIRLSESI EAKKAMAPDK LAELWTIDPR RAKRILANRQ SASRSKERKA RYMSELERKV 180 LNLQTEATTL SAQLSLFQRD TTGLSNENTE LKLRLQAMEQ QAQLRDALNK ALKQDVERLK 240 IATGELMSSS DSYNFGMQHL PYTQSSFYSQ QPQQGQNDPH HTQMPQFHPL QSNMLNHHHS 300 LLLASQSQVL SEMQGLDINA RGSHFVKAEG PSVSASESSG MF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028084122.1 | 1e-158 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 1e-109 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A2R6RR48 | 0.0 | A0A2R6RR48_ACTCH; Transcription factor RF2b like | ||||
STRING | VIT_13s0067g02900.t01 | 1e-156 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3425 | 23 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 4e-99 | bZIP family protein |
Publications ? help Back to Top | |||
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