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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT5G67000.1 |
Common Name | ERF122, K8A10.7 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
ERF |
Protein Properties |
Length: 184aa MW: 20614.2 Da PI: 9.5052 |
Description |
ERF family protein |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 46.7 | 8.1e-15 | 119 | 169 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+W+AeI+dp+ + r +lg+f tae+Aa+ + a+ +++
AT5G67000.1 119 KKYKGVRKKP-SGKWAAEIWDPR----SkSRRWLGTFLTAEMAAQSYNDAAAEYRA 169
59*****999.7*********84....25999*******************99985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MLTPFCSSHH LQEKMNSCQS NPTKMDNSEN VLFNDQNENF TLVAPHPSSS YLTRDQEHEI 60 MVSALRQVIS NSGADDASSS NLIITSVPPP DAGPCPLCGV AGCYGCTLQR PHREVKKEKK 120 YKGVRKKPSG KWAAEIWDPR SKSRRWLGTF LTAEMAAQSY NDAAAEYRAR RGKTNGEGIK 180 RRWR
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Functional Description ? help
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Source |
Description |
TAIR | encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB026640 | 0.0 | AB026640.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10. |
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
GenBank | DQ145775 | 0.0 | DQ145775.1 Arabidopsis thaliana AP2/EREBP transcription factor (At5g67000) mRNA, complete cds. |
Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Yang T,Poovaiah BW
A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants. J. Biol. Chem., 2002. 277(47): p. 45049-58 [PMID:12218065] - Feng JX, et al.
An annotation update via cDNA sequence analysis and comprehensive profiling of developmental, hormonal or environmental responsiveness of the Arabidopsis AP2/EREBP transcription factor gene family. Plant Mol. Biol., 2005. 59(6): p. 853-68 [PMID:16307362] - Nakano T,Suzuki K,Fujimura T,Shinshi H
Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol., 2006. 140(2): p. 411-32 [PMID:16407444]
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