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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT5G44210.1 |
Common Name | ATERF9, ATERF-9, ERF080, ERF9, ERF-9, MLN1.14 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
ERF |
Protein Properties |
Length: 200aa MW: 22267.2 Da PI: 10.6262 |
Description |
erf domain protein 9 |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.6 | 2e-20 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a++ a+++++g
AT5G44210.1 32 HFRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDTAAREFRG 81
69*******.**********8...557************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006952 | Biological Process | defense response |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0016020 | Cellular Component | membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG 60 TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG GENDSYVNRT TVTTAREMTR 120 QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK 180 VEPRRELNLD LNLAPPVVDV
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Functional Description ? help
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Source |
Description |
TAIR | encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. |
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Function -- GeneRIF ? help
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- ERF9 and ERF14 are involved in the interaction between Piriformospora and Arabidopsis. Inactivation of these genes diminishes the P. indica-induced growth promotion and activates the expression of the PATHOGENESIS-RELATED genes.
[PMID: 20505369] - The transcriptional repressor ERF9 participates in plant defense mechanisms against necrotic fungi mediated by the DEAR1-dependent ethylene/JA signaling pathway.
[PMID: 24157210]
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB005239 | 0.0 | AB005239.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLN1. |
GenBank | AB047648 | 0.0 | AB047648.1 Arabidopsis thaliana AtERF9 gene for ERF domain protein 9, complete cds. |
GenBank | AY560856 | 0.0 | AY560856.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At5g44210) mRNA, complete cds. |
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Ohta M,Matsui K,Hiratsu K,Shinshi H,Ohme-Takagi M
Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. Plant Cell, 2001. 13(8): p. 1959-68 [PMID:11487705] - Nakano T,Suzuki K,Fujimura T,Shinshi H
Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol., 2006. 140(2): p. 411-32 [PMID:16407444] - Mitra SK,Gantt JA,Ruby JF,Clouse SD,Goshe MB
Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J. Proteome Res., 2007. 6(5): p. 1933-50 [PMID:17432890] - Mah
Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. Plant Mol. Biol., 2007. 64(6): p. 699-711 [PMID:17551672] - Dombrecht B, et al.
MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis. Plant Cell, 2007. 19(7): p. 2225-45 [PMID:17616737] - Broekgaarden C, et al.
Genotypic variation in genome-wide transcription profiles induced by insect feeding: Brassica oleracea--Pieris rapae interactions. BMC Genomics, 2007. 8: p. 239 [PMID:17640338] - Manzano C,Abraham Z,L
Identification of ubiquitinated proteins in Arabidopsis. Plant Mol. Biol., 2008. 68(1-2): p. 145-58 [PMID:18535787] - Camehl I,Oelm
Do ethylene response factorS9 and -14 repress PR gene expression in the interaction between Piriformospora indica and Arabidopsis? Plant Signal Behav, 2010. 5(8): p. 932-6 [PMID:20505369] - Shin R,Jez JM,Basra A,Zhang B,Schachtman DP
14-3-3 proteins fine-tune plant nutrient metabolism. FEBS Lett., 2011. 585(1): p. 143-7 [PMID:21094157] - Arabidopsis Interactome Mapping Consortium
Evidence for network evolution in an Arabidopsis interactome map. Science, 2011. 333(6042): p. 601-7 [PMID:21798944] - Maruyama Y, et al.
The Arabidopsis transcriptional repressor ERF9 participates in resistance against necrotrophic fungi. Plant Sci., 2013. 213: p. 79-87 [PMID:24157210] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Van den Broeck L, et al.
From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress. Mol. Syst. Biol., 2017. 13(12): p. 961 [PMID:29269383] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470] - Riechmann JL,Meyerowitz EM
The AP2/EREBP family of plant transcription factors. Biol. Chem., 1998. 379(6): p. 633-46 [PMID:9687012]
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