PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT4G22070.1 | ||||||||
Common Name | ATWRKY31, F1N20.170, WRKY31 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 538aa MW: 58540.9 Da PI: 5.9409 | ||||||||
Description | WRKY DNA-binding protein 31 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.8 | 7.1e-31 | 297 | 355 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ AT4G22070.1 297 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAgGCPVRKQVQRCAEDRSILITTYEGNHNHP 355 7****************************9****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.9E-34 | 281 | 357 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.19E-28 | 289 | 357 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.918 | 291 | 357 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-36 | 296 | 356 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.3E-27 | 298 | 355 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000084 | anatomy | plant sperm cell | ||||
PO:0009005 | anatomy | root | ||||
PO:0009032 | anatomy | petal | ||||
PO:0009046 | anatomy | flower | ||||
PO:0025022 | anatomy | collective leaf structure | ||||
PO:0007611 | developmental stage | petal differentiation and expansion stage | ||||
PO:0007616 | developmental stage | flowering stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence Send to blast |
MFRFPVSLGG SRDEDRHDQI TPLDDHRVVV DEVDFFSEKR DRVSRENIND DDDEGNKVLI 60 KMEGSRVEEN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM DMEDKRAKIE NAQLQEELKK 120 MKIENQRLRD MLSQATTNFN ALQMQLVAVM RQQEQRNSSQ DHLLAQESKA EGRKRQELQI 180 MVPRQFMDLG PSSGAAEHGA EVSSEERTTV RSGSPPSLLE SSNPRENGKR LLGREESSEE 240 SESNAWGNPN KVPKHNPSSS NSNGNRNGNV IDQSAAEATM RKARVSVRAR SEAAMISDGC 300 QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA 360 TAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS SSMATISASA PFPTITLDLT 420 NSPNGNNPNM TTNNPLMQFA QRPGFNPAVL PQVVGQAMYN NQQQSKFSGL QLPAQPLQIA 480 ATSSVAESVS AASAAIASDP NFAAALAAAI TSIMNGSSHQ NNNTNNNNVA TSNNDSRQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-23 | 283 | 359 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 186512258 | 0.0 | ||||
Genevisible | 254347_at | 0.0 | ||||
Expression Atlas | AT4G22070 | - | ||||
AtGenExpress | AT4G22070 | - | ||||
ATTED-II | AT4G22070 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
TAIR | member of WRKY Transcription Factor; Group II-b | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00447 | DAP | 27203113 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT4G22070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT4G22070 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY052648 | 0.0 | AY052648.1 Arabidopsis thaliana WRKY transcription factor 31 (WRKY31) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001328880.1 | 0.0 | WRKY DNA-binding protein 31 | ||||
Refseq | NP_001328881.1 | 0.0 | WRKY DNA-binding protein 31 | ||||
Refseq | NP_001328882.1 | 0.0 | WRKY DNA-binding protein 31 | ||||
Refseq | NP_567644.1 | 0.0 | WRKY DNA-binding protein 31 | ||||
Swissprot | Q93WT0 | 0.0 | WRK31_ARATH; Probable WRKY transcription factor 31 | ||||
TrEMBL | A0A178UV25 | 0.0 | A0A178UV25_ARATH; WRKY31 | ||||
STRING | AT4G22070.1 | 0.0 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1057 | 28 | 107 | Representative plant | OGRP14 | 17 | 875 |
Link Out ? help Back to Top | |
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Phytozome | AT4G22070.1 |
Entrez Gene | 828296 |
iHOP | AT4G22070 |
wikigenes | AT4G22070 |
Publications ? help Back to Top | |||
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