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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT4G00270.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
GeBP |
Protein Properties |
Length: 302aa MW: 34058 Da PI: 6.0323 |
Description |
DNA-binding storekeeper protein-related transcriptional regulator |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 115.3 | 3.5e-36 | 64 | 159 | 3 | 98 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
+ r+w+eeDe+++L+Gl+d++aktg +p+ d+daf++f+ +si ++sk+q+++Kir+LK++f+ +++k+++g++p+f++++d+++f++s++iWg+
AT4G00270.1 64 IVRIWNEEDELSILKGLVDYRAKTGFNPKIDWDAFCSFLGSSIVERFSKDQVLSKIRKLKRRFHVHSEKINQGNDPKFTRSSDSEAFGFSSMIWGQ 159
68********************************************************************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
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to blast |
MVTPKQIDFS SCVGADNSNG TLSHRRSPRN IPSSKRAASV AEEETMKKKM KMKKKKKKLD 60 PPLIVRIWNE EDELSILKGL VDYRAKTGFN PKIDWDAFCS FLGSSIVERF SKDQVLSKIR 120 KLKRRFHVHS EKINQGNDPK FTRSSDSEAF GFSSMIWGQG DDDGMDKEHE VNGNGAAENR 180 TNESGEEMLK EHEEEVANTE LLNENGAAKT TENGTSSGKE RHDEDNDDDD ELCAVQDAFE 240 AVMSQGLSGY QKKLQLEKLM NLGNGKRREL SDEWKALCVE ETRFNIKKLR FSAKLAEAAN 300 DS
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in the apical meristem and young leaf primordia (PubMed:12535344, PubMed:18162594). Not detected in emerging or mature leaves (PubMed:12535344). Detected in the vascular tissues of cotyledons and leaves, in hydathodes and at the base of flowers and siliques, but not in roots (PubMed:18162594). {ECO:0000269|PubMed:12535344, ECO:0000269|PubMed:18162594}. |
Functional Description ? help
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Source |
Description |
UniProt | DNA-binding protein, which specifically recognizes the GL1 enhancer sequence (PubMed:12535344). May be involved in leaf initiation (PubMed:12535344). May play redundant roles with GPL1 and GPL2 in cytokinin responses by regulating the transcript levels of type-A ARR response genes (PubMed:18162594). Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893). May play a role in plant defense (PubMed:29192025). {ECO:0000269|PubMed:12535344, ECO:0000269|PubMed:21875893, ECO:0000269|PubMed:29192025, ECO:0000305|PubMed:18162594}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by KNAT1. Not regulated by gibberellins. {ECO:0000269|PubMed:12535344}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF361590 | 0.0 | AF361590.1 Arabidopsis thaliana AT4g00270/A_IG005I10_11 mRNA, complete cds. |
GenBank | AY074837 | 0.0 | AY074837.1 Arabidopsis thaliana AT4g00270/A_IG005I10_11 mRNA, complete cds. |
Publications
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- Curaba J,Herzog M,Vachon G
GeBP, the first member of a new gene family in Arabidopsis, encodes a nuclear protein with DNA-binding activity and is regulated by KNAT1. Plant J., 2003. 33(2): p. 305-17 [PMID:12535344] - Dal Bosco C, et al.
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. J. Biol. Chem., 2004. 279(2): p. 1060-9 [PMID:14576160] - Wagner S, et al.
Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell, 2006. 18(7): p. 1722-35 [PMID:16766694] - Chevalier F, et al.
GeBP and GeBP-like proteins are noncanonical leucine-zipper transcription factors that regulate cytokinin response in Arabidopsis. Plant Physiol., 2008. 146(3): p. 1142-54 [PMID:18162594] - Luhua S, et al.
Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. Physiol Plant, 2013. 148(3): p. 322-33 [PMID:23517122] - Nietzsche M,Schießl I,Börnke F
The complex becomes more complex: protein-protein interactions of SnRK1 with DUF581 family proteins provide a framework for cell- and stimulus type-specific SnRK1 signaling in plants. Front Plant Sci, 2014. 5: p. 54 [PMID:24600465] - Nietzsche M, et al.
STOREKEEPER RELATED1/G-Element Binding Protein (STKR1) Interacts with Protein Kinase SnRK1. Plant Physiol., 2018. 176(2): p. 1773-1792 [PMID:29192025]
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