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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT2G44745.1 |
Common Name | AtWRKY12, F16B22.46, WRKY12 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
WRKY |
Protein Properties |
Length: 218aa MW: 24548 Da PI: 8.7243 |
Description |
WRKY family protein |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.9 | 1.8e-32 | 144 | 201 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh
AT2G44745.1 144 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNH 201
59******************************************************** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN 60 SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN NDAHSNSWWR SNSGSGDMKN 120 KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR 180 VERLSEDCRM VITTYEGRHN HIPSDDSTSP DHDCLSSF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Function -- GeneRIF ? help
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- WRKY12 and WRKY13 oppositely modulate flowering time under SD conditions
[PMID: 27592586] - The results suggest that WRKY12 directly targets GSH1 and indirectly represses phytochelatin (PC) synthesis-related gene expression to negatively regulate Cd accumulation and tolerance in Arabidopsis.
[PMID: 30617455]
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF404857 | 0.0 | AF404857.1 Arabidopsis thaliana WRKY transcription factor 12 (WRKY12) mRNA, complete cds. |
GenBank | BT028992 | 0.0 | BT028992.1 Arabidopsis thaliana At2g44745 mRNA, complete cds. |
Publications
? help Back to Top |
- Eulgem T,Rushton PJ,Robatzek S,Somssich IE
The WRKY superfamily of plant transcription factors. Trends Plant Sci., 2000. 5(5): p. 199-206 [PMID:10785665] - Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Manzano C,Abraham Z,L
Identification of ubiquitinated proteins in Arabidopsis. Plant Mol. Biol., 2008. 68(1-2): p. 145-58 [PMID:18535787] - Lasserre E,Jobet E,Llauro C,Delseny M
AtERF38 (At2g35700), an AP2/ERF family transcription factor gene from Arabidopsis thaliana, is expressed in specific cell types of roots, stems and seeds that undergo suberization. Plant Physiol. Biochem., 2008. 46(12): p. 1051-61 [PMID:18723362] - Yu Y, et al.
MlWRKY12, a novel Miscanthus transcription factor, participates in pith secondary cell wall formation and promotes flowering. Plant Sci., 2013. 212: p. 1-9 [PMID:24094048] - Yang L, et al.
PtrWRKY19, a novel WRKY transcription factor, contributes to the regulation of pith secondary wall formation in Populus trichocarpa. Sci Rep, 2016. 6: p. 18643 [PMID:26819184] - Li W,Wang H,Yu D
Arabidopsis WRKY Transcription Factors WRKY12 and WRKY13 Oppositely Regulate Flowering under Short-Day Conditions. Mol Plant, 2016. 9(11): p. 1492-1503 [PMID:27592586] - Han Y, et al.
WRKY12 represses GSH1 expression to negatively regulate cadmium tolerance in Arabidopsis. Plant Mol. Biol., 2019. 99(1-2): p. 149-159 [PMID:30617455]
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