PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G17770.1
Common NameATBZIP27, BZIP27, FDP
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 156aa    MW: 17475.7 Da    PI: 9.2021
Description basic region/leucine zipper motif 27
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G17770.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.4e-08125147426
                  XCHHHCHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                  ++r +r++kNRe+A rsR+RK++
  AT2G17770.1 125 DRRYKRMIKNRESAARSRARKQE 147
                  7899******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579593.37E-5126149No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-6126150No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0009009anatomyplant embryo
PO:0009010anatomyseed
PO:0009046anatomyflower
PO:0025022anatomycollective leaf structure
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0001081developmental stagemature plant embryo stage
PO:0004507developmental stageplant embryo bilateral stage
PO:0007611developmental stagepetal differentiation and expansion stage
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI  60
VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR SFEESAKFGC LGKKRGQDSD  120
DTRGDRRYKR MIKNRESAAR SRARKQECVS PHSSTF
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible264620_at0.0
Expression AtlasAT2G17770-
AtGenExpressAT2G17770-
ATTED-IIAT2G17770-
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed on the flanks of the shoot apex. {ECO:0000269|PubMed:23543784}.
Functional Description ? help Back to Top
Source Description
TAIREncodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.
UniProtTranscription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:23543784}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G17770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Interaction ? help Back to Top
Source Intact With
BioGRIDAT2G17770, AT4G35900
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G17770
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0293280.0BT029328.1 Arabidopsis thaliana At2g17770 mRNA, complete cds.
GenBankCP0026850.0CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence.
GenBankGQ1771330.0GQ177133.1 Arabidopsis thaliana ecotype Ag-0 FDP gene, complete sequence.
GenBankGQ1771350.0GQ177135.1 Arabidopsis thaliana ecotype C24 FDP gene, complete sequence.
GenBankGQ1771360.0GQ177136.1 Arabidopsis thaliana ecotype Sorbo FDP gene, complete sequence.
GenBankGQ1771390.0GQ177139.1 Arabidopsis thaliana ecotype An-1 FDP gene, complete sequence.
GenBankGQ1771400.0GQ177140.1 Arabidopsis thaliana ecotype Bay-0 FDP gene, complete sequence.
GenBankGQ1771410.0GQ177141.1 Arabidopsis thaliana ecotype Br-0 FDP gene, complete sequence.
GenBankGQ1771420.0GQ177142.1 Arabidopsis thaliana ecotype Ct-1 FDP gene, complete sequence.
GenBankGQ1771440.0GQ177144.1 Arabidopsis thaliana ecotype Ei-2 FDP gene, complete sequence.
GenBankGQ1771450.0GQ177145.1 Arabidopsis thaliana ecotype Ga-0 FDP gene, complete sequence.
GenBankGQ1771460.0GQ177146.1 Arabidopsis thaliana ecotype Gy-0 FDP gene, complete sequence.
GenBankGQ1771470.0GQ177147.1 Arabidopsis thaliana ecotype Kas-2 FDP gene, complete sequence.
GenBankGQ1771490.0GQ177149.1 Arabidopsis thaliana ecotype Mrk-0 FDP gene, complete sequence.
GenBankGQ1771500.0GQ177150.1 Arabidopsis thaliana ecotype Ms-0 FDP gene, complete sequence.
GenBankGQ1771510.0GQ177151.1 Arabidopsis thaliana ecotype Mt-0 FDP gene, complete sequence.
GenBankGQ1771520.0GQ177152.1 Arabidopsis thaliana ecotype Nok-3 FDP gene, complete sequence.
GenBankGQ1771530.0GQ177153.1 Arabidopsis thaliana ecotype Oy-0 FDP gene, complete sequence.
GenBankGQ1771540.0GQ177154.1 Arabidopsis thaliana ecotype Wa-1 FDP gene, complete sequence.
GenBankGQ1771560.0GQ177156.1 Arabidopsis thaliana ecotype Nd-1 FDP gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001324976.11e-114basic region/leucine zipper motif 27
SwissprotQ7PCC61e-108FDP_ARATH; bZIP transcription factor 27
TrEMBLA0A178VTS71e-107A0A178VTS7_ARATH; FDP
STRINGAT2G17770.21e-105(Arabidopsis thaliana)
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Jakoby M, et al.
    bZIP transcription factors in Arabidopsis.
    Trends Plant Sci., 2002. 7(3): p. 106-11
    [PMID:11906833]
  3. Abe M, et al.
    FD, a bZIP protein mediating signals from the floral pathway integrator FT at the shoot apex.
    Science, 2005. 309(5737): p. 1052-6
    [PMID:16099979]
  4. Wigge PA, et al.
    Integration of spatial and temporal information during floral induction in Arabidopsis.
    Science, 2005. 309(5737): p. 1056-9
    [PMID:16099980]
  5. Ikeda Y,Kobayashi Y,Yamaguchi A,Abe M,Araki T
    Molecular basis of late-flowering phenotype caused by dominant epi-alleles of the FWA locus in Arabidopsis.
    Plant Cell Physiol., 2007. 48(2): p. 205-20
    [PMID:17189287]
  6. Libault M,Wan J,Czechowski T,Udvardi M,Stacey G
    Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.
    Mol. Plant Microbe Interact., 2007. 20(8): p. 900-11
    [PMID:17722694]
  7. Arabidopsis Interactome Mapping Consortium
    Evidence for network evolution in an Arabidopsis interactome map.
    Science, 2011. 333(6042): p. 601-7
    [PMID:21798944]
  8. Jang S,Li HY,Kuo ML
    Ectopic expression of Arabidopsis FD and FD PARALOGUE in rice results in dwarfism with size reduction of spikelets.
    Sci Rep, 2017. 7: p. 44477
    [PMID:28290557]
  9. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]