PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678468924
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 304aa    MW: 33636.9 Da    PI: 7.3005
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678468924genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.47.9e-29128181155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                ++rl W+p+LH+rFv++v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  678468924 128 RQRLIWSPQLHKRFVDVVARL-GLKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 181
                58*******************.9*******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.229125184IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.4E-29126186IPR009057Homeodomain-like
SuperFamilySSF466891.54E-18126185IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-22129181IPR006447Myb domain, plants
PfamPF002494.6E-8133180IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MDEGLTVDDQ VPEWEAGLPS LDNLPPLTQP LIPTPLASAF KIYLGPPRRP METNLPSENT  60
WSSMGLGMSS DSESNFKYFG QDDGMDEGEG DEGSQSNDCG MSEQIDDLVV DNGGYNQSTV  120
MAKTLKKRQR LIWSPQLHKR FVDVVARLGL KNAVPKTIMQ LMNVEGLTRE NVASHLQKYR  180
LYLKRMPGMS NEGSFRSDHL FASTPQPSQS LLKPSNAGPA RHGNKVFSGT HSNGTTASTC  240
VGLPMPMRYP PTQSIMAMQM MGMTGDGNGY IRYDTAHSNH SDHYQKNWRQ ANIPQGLTHK  300
KSKC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A2e-31128184157Transcription factor LUX
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678468924
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089505.13e-85transcription factor LUX
RefseqXP_020552586.13e-85transcription factor LUX
RefseqXP_020552587.13e-85transcription factor LUX
TrEMBLA0A2G9I6C15e-82A0A2G9I6C1_9LAMI; Uncharacterized protein
STRINGMigut.D00884.1.p2e-70(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24322354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.27e-49G2-like family protein