PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678466143
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 428aa    MW: 48949.5 Da    PI: 7.6816
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678466143genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018186209123
                EEETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                y C+ Cg+ ++++++Lk+H +  H
  678466143 186 YICSVCGRKCKTHMDLKKHFQQlH 209
                89*****************76655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10106.9E-8106176IPR029060PIN domain-like
PROSITE profilePS5015710.658186214IPR007087Zinc finger, C2H2
PROSITE patternPS000280188209IPR007087Zinc finger, C2H2
CDDcd061672.13E-11215340No hitNo description
Gene3DG3DSA:3.40.50.10106.9E-8271338IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MIILPSRKYP TEQSPQSHLY PPLGLLVQVT GVGRKPPEMV ATINLIERLN LNTRFLFSSS  60
ARPHKSFATS LHFDSNPRRR FFPVKSCASH GEIDMVRTKE GVYAPKEKRV VILWDLDNKP  120
PRGPPYDAAI ALKSVAQKFG SVIDISAYAN RHAFIHIPQW VVEERRERRQ IDLLERKELV  180
SSPQPYICSV CGRKCKTHMD LKKHFQQLHE RERQKKLGRM RSLKGKKRQR FKERFIDGNE  240
KYNEAARSLL TPKVGYGLAQ ELKRAGVFVK TVQDKPQAAD WALKRQILHS MSSGVDWIVL  300
VSDDSDFSEM LNKARDANIG TVVVGDQDRS LGRFADVWIP WIKVENRDVK DSDLEMRMAD  360
STDDVHGGFT VSFFDGDTEF RGSDIRFSGS SLSGEYDEDD DWITATLTEE EEMGDGDFLL  420
DSEDESWL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678466143
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069738.11e-176uncharacterized protein LOC105155542
TrEMBLA0A2G9GXZ91e-177A0A2G9GXZ9_9LAMI; Uncharacterized protein
STRINGMigut.C00545.1.p1e-167(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-148C2H2-like zinc finger protein