PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678454863
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 382aa    MW: 41707 Da    PI: 9.6902
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678454863genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.14.5e-39119179262
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                +e+alkcprC+stntkfCy+nnysl qPr+fCk+CrryWtkGGalrnvPvGgg+r+nk+s+
  678454863 119 PEAALKCPRCESTNTKFCYFNNYSLLQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKRSK 179
                57889*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-33103172IPR003851Zinc finger, Dof-type
PfamPF027011.6E-32122177IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.208123177IPR003851Zinc finger, Dof-type
PROSITE patternPS013610125161IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MHPQKEPPLF ELLQFMLGIL VQILMPQRQN PDTNHQHLLQ LYKGENKQRS TAMAFSSIPG  60
YFDAGNWHQQ QNHQIIGGSG GNNHLLPPPP PPPPPLPHGG AIRPGSMAER ARMANIPTPE  120
AALKCPRCES TNTKFCYFNN YSLLQPRHFC KTCRRYWTKG GALRNVPVGG GCRRNKRSKS  180
RSSMSPASAE RQTNTSSTNT ASTTNSGSTG VISLTSQLPQ LRFLSPLSQL TDTFSGDMGL  240
NYSGITAPAV GVSNEMNFHG TSNALGSTGE VASLFSNATI DPWRLQQPLS FLGGLEQPPP  300
GMFRFCGGEP SFMGVEASSD QVRPKHSILN PQIPSVKLEE NRLQLNLSRQ MITGIQGTDH  360
WNANPSWTEL SGFSSSSTNN PL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678454863
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095199.11e-114dof zinc finger protein DOF5.1
TrEMBLA0A2G9H3771e-109A0A2G9H377_9LAMI; Uncharacterized protein
STRINGAquca_003_00022.12e-92(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.16e-45DNA binding with one finger 2.4