PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450162
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 298aa    MW: 32486.6 Da    PI: 9.5222
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450162genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof74.31.6e-2366104341
     zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWt 41 
                + alkcprCdstntkfCy+nnyslsqPr+fCkaCrry  
  678450162  66 DPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYHS 104
                6789*********************************76 PP
2zf-Dof42.81.1e-131161483062
     zf-Dof  30 ryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                ry   + +ryWt+GGalrnvPvGgg+r+nk+s+
  678450162 116 RYNFITVNRYWTRGGALRNVPVGGGCRRNKRSK 148
                66666789**********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-3149144IPR003851Zinc finger, Dof-type
PfamPF027013.3E-1968103IPR003851Zinc finger, Dof-type
PROSITE profilePS5088419.24769146IPR003851Zinc finger, Dof-type
PfamPF027011.8E-8116146IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MVFSSIPAYL DASGFHQENS QVIGRNSSNP LLVSSVHPAP APPHGGGIRP GSMVERARMA  60
NIPMPDPALK CPRCDSTNTK FCYFNNYSLS QPRHFCKACR RYHSKIFIGP CYICARYNFI  120
TVNRYWTRGG ALRNVPVGGG CRRNKRSKSS SSKSHASIKT TSTTNTCTTV GPPAAFSGLN  180
PPLRFMSPLS QLSNTSAGDI DLSFTGIRSP LFHGTSIFSG DGGSNHGVEP WRLPFFADVE  240
CSPPGMFQFH SDESSFHEKA PATSTPVKME ESVSRLNPIT SIHGTEQWNP SPAAWNNL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678450162
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027069259.11e-69dof zinc finger protein DOF2.4
TrEMBLA0A4D8YJT34e-71A0A4D8YJT3_SALSN; Uncharacterized protein
STRINGXP_004515618.13e-62(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.12e-40Dof family protein