PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678449638
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 294aa    MW: 32585.3 Da    PI: 7.5056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678449638genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.4e-11120165555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                h ++Er+RR+++ ++f  L  ++P +     kK +K ++L  A++Y+k Lq
  678449638 120 HIIAERKRREQLSQRFLALSAIVPGL-----KKTDKTSVLGDAIKYLKFLQ 165
                899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.939115164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-17116183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-8120165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.57E-12120169No hitNo description
Gene3DG3DSA:4.10.280.102.4E-15120177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-13121170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MFQGLDNPMF SDQFDLLEEM DEELAAVLGE NFEIPCLSRM NEFTPPPAKL QKTNNHSSVT  60
APPRVASTPI ILNFGPEKPP SANSTTLSPG GSDSPNEEPK APQPVRRSSR IRPPSQTYDH  120
IIAERKRREQ LSQRFLALSA IVPGLKKTDK TSVLGDAIKY LKFLQERVQL LEEQTSKKSI  180
ESVVLIRKST AEDNVGGVAE PLPEIEARLC NSQILILIQC EYRKGILANI IYNVEKLNLS  240
VVNTYVASIG RLAHHVTIVT EMEKGFNLTV KEVVTRMREA LQPRNPSSAT ALSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678449638
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073652.11e-100transcription factor bHLH18-like
TrEMBLA0A2G9GXQ81e-105A0A2G9GXQ8_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-47bHLH family protein