PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447027
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 334aa    MW: 36290.6 Da    PI: 9.7593
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447027genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.61.6e-3973132362
     zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+r+nk+s+
  678447027  73 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKRSK 132
                7789*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3356125IPR003851Zinc finger, Dof-type
PfamPF027014.4E-3375130IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.59976130IPR003851Zinc finger, Dof-type
PROSITE patternPS01361078114IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MAFSSIPGYF DASNWHQQQN HQIIGGHAAK NHFIPPPAQP PPPPQPPLPH GGGSIRPGSM  60
AERARMANIP MPEAALKCPR CESTNTKFCY FNNYSLSQPR HFCKTCRRYW TKGGALRNVP  120
VGGGCRRNKR SKSRSSMSPA STDRQTNTSS TNIASTTNGG SAGIIGLSSQ LPQLRFTSPL  180
SQLTDTFTGD MGFDYSGITA PVVGVSNEMH FHGMSNVLGS TGEMASLFSN GNGNIDPWSL  240
QQPLSFLGDQ EVPPTGIFRF HGGEHSVMRS ETSCDQVRPK FSALSHQNPS VKLEPQMNLS  300
RQIISGIQRT DPWNANPTWN ELSGFSSSST NKPL
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447027
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095199.11e-110dof zinc finger protein DOF5.1
TrEMBLA0A2G9H3771e-104A0A2G9H377_9LAMI; Uncharacterized protein
STRINGEOY075479e-82(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.14e-43Dof family protein