PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678440776

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 350aa MW: 38076.7 Da PI: 8.9823

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678440776	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.8e-39	115	175	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+al+cprCdstntkfCy+nnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+r+nk+s+ 678440776 115 PESALRCPRCDSTNTKFCYFNNYSLSQPRHFCKSCRRYWTKGGALRNVPVGGGCRRNKRSK 175 57889*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.450.50	3.9E-11	1	70	IPR010908	Longin domain
ProDom	PD007478	3.0E-34	103	173	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.5E-33	117	173	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.758	119	173	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	121	157	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence Send to blast
MVKLTMIASI TDALALVEGL SDGRDVPDAE FYKHQAKSLF KRLSVGQNEP SRMSIETGPC 60 MFQYSKSHQV IGSSSGNSSL IPSLQASQPH GGGGAAVVRS GSMVERARLA NIPMPESALR 120 CPRCDSTNTK FCYFNNYSLS QPRHFCKSCR RYWTKGGALR NVPVGGGCRR NKRSKTNASR 180 AQTRSERPNT ATASGSLPAN TTGGGGNGGL TPQLPPLRFI PQLSENFNTA HEMVGSDLLN 240 GGSLAPLFSC SDGSLEQWRF HQAPQLSFMD PSPEFQHGEP PFIVADMLQP TKHSERFFPQ 300 GESVKTEENP QVNPPRQAMG AKLHGNDHDW SNAPSSWTEF CSPSTTTNRM

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence Send to blast

MVKLTMIASI TDALALVEGL SDGRDVPDAE FYKHQAKSLF KRLSVGQNEP SRMSIETGPC  60
MFQYSKSHQV IGSSSGNSSL IPSLQASQPH GGGGAAVVRS GSMVERARLA NIPMPESALR  120
CPRCDSTNTK FCYFNNYSLS QPRHFCKSCR RYWTKGGALR NVPVGGGCRR NKRSKTNASR  180
AQTRSERPNT ATASGSLPAN TTGGGGNGGL TPQLPPLRFI PQLSENFNTA HEMVGSDLLN  240
GGSLAPLFSC SDGSLEQWRF HQAPQLSFMD PSPEFQHGEP PFIVADMLQP TKHSERFFPQ  300
GESVKTEENP QVNPPRQAMG AKLHGNDHDW SNAPSSWTEF CSPSTTTNRM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678440776

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020549341.1	1e-75	LOW QUALITY PROTEIN: dof zinc finger protein DOF5.1-like
TrEMBL	A0A2Z7D1R0	1e-64	A0A2Z7D1R0_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1917	24	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-43	OBF-binding protein 3