PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678434169
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 225aa    MW: 25643.1 Da    PI: 4.6063
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678434169genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-09122164855
                HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                + rrRR+ri ++ +eL +l+P       +K++ ae+L+ A +YIk L+
  678434169 122 AARRRRRRITERTHELGKLVPGG-----QKMNTAEMLKAAYKYIKFLE 164
                67*******************86.....7****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.03E-13113175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.967114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-12119176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-11120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-7123164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.94E-4130167No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGLSSFQHSD CSAVDPEMTL LDHFLDLPPE SAWLAGSFSA SADSVFPEFP FTVTTPLEPE  60
PFFSDQDFEL LPCFKRRKGY DCQQFDDGFH FPSLCFNVPF PSTPESTAPQ PEKASVSMQS  120
VAARRRRRRI TERTHELGKL VPGGQKMNTA EMLKAAYKYI KFLEAQVGVL QFMNSKQGTE  180
FRDEEMQWLL QSPLIQEKLY DAEICLVSQK CVEEAMENTR ESMQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128RRRRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678434169
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022893750.15e-46transcription factor bHLH52-like
RefseqXP_022893751.15e-46transcription factor bHLH52-like
TrEMBLA0A2G9G0223e-39A0A2G9G022_9LAMI; Uncharacterized protein
STRINGMigut.M01923.1.p3e-39(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-26bHLH family protein