PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678400283
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 240aa    MW: 27100.4 Da    PI: 9.0191
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678400283genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.3e-32156214159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+
  678400283 156 LDDGYRWRKYGQKAVKNNRFPRSYYRCTHEGCSVKKQVQRLSKDEGVVVTTYEGMHTHP 214
                59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-33141215IPR003657WRKY domain
SuperFamilySSF1182902.48E-29148215IPR003657WRKY domain
PROSITE profilePS5081129.826151216IPR003657WRKY domain
SMARTSM007742.4E-38156215IPR003657WRKY domain
PfamPF031069.6E-27157214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MCDDRNENQG DRLVENIASA SIPKVGWSVQ PAGVESTGFL VWKRDHSTQE SSCWPSIRIS  60
PVNFNSISTT RLRAEAVHKT ICVLLRCATP HLVLNCIPPP FLAVASMDNY YFQASSSSSP  120
SQPPLEGSDG PPGRTQKKSG KKPRYAFQTR SQVDILDDGY RWRKYGQKAV KNNRFPRSYY  180
RCTHEGCSVK KQVQRLSKDE GVVVTTYEGM HTHPVQKSSD DFERILSQMQ IYNDHNTTLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-26146213774Probable WRKY transcription factor 4
2lex_A2e-26146213774Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMap678400283
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22042461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.14e-52WRKY DNA-binding protein 75