PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678393118
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 370aa    MW: 40332.6 Da    PI: 9.1474
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678393118genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55.1e-05147170123
                EEETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                ++C+ Cg++F+  ++L++H  + H
  678393118 147 HSCSECGEVFPKFESLEQHKAVtH 170
                79*****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015711.385147175IPR007087Zinc finger, C2H2
PROSITE patternPS000280149170IPR007087Zinc finger, C2H2
SuperFamilySSF563993.74E-23172367No hitNo description
Gene3DG3DSA:3.90.228.105.3E-12172367IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MALEPRTPGN LRKKLKKPSH SSWENVINLL TCNQIDDSVP TIHQLTTKLT PSFFCSGICS  60
FHDVVRANSR VADNSPVTQK VQLISKARNS TFSRSGSSGS PAVGSQGSQN ARAYTATGYS  120
HRGTQLRKLT GCYECHTIFD PSRPSTHSCS ECGEVFPKFE SLEQHKAVTH AELGPDDSSR  180
NIVEIIFKSS WLKRDHTICK IERILKVHNT QRTIQRFEDY RDAVKQGATA GPKKNPRCAA  240
DGNELLRFHA ATLTCTLGAR GSSSLCTAGA ACGVCTIIRH GFQDSKAKGV RTTATSGRAH  300
DCLDEKSQTR AMLVCRVIAG RVKHVAGDDD GGPYDSVSSV AGVYSDSEEL VVFNSRAILP  360
CFVVIYKLRV
Cis-element ? help Back to Top
SourceLink
PlantRegMap678393118
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825722e-35AC182572.2 Erythranthe guttata clone MGBa-75A14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074673.11e-143uncharacterized protein LOC105159339 isoform X2
TrEMBLA0A2G9GUH11e-140A0A2G9GUH1_9LAMI; Uncharacterized protein
STRINGXP_006473648.11e-136(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-116C2H2-like zinc finger protein