PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678367394
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Dof
Protein Properties Length: 355aa    MW: 39005.2 Da    PI: 9.4733
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678367394genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.53.5e-39128188262
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                +e+al+cprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+nk+s+
  678367394 128 PESALRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRSK 188
                57889*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-33112181IPR003851Zinc finger, Dof-type
PfamPF027019.8E-33130186IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.711132186IPR003851Zinc finger, Dof-type
PROSITE patternPS013610134170IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MLAEPQRRNL VLTKGNFSAI RCRYDFKLLS IYDFVDTFVL SFADQKKLKP WTFLESRCAP  60
YTTTSIPIVF NAISSNHSSY PILLDDLVIG SSGGSSLIPP QPHGGGDSAA IRPGSMAERA  120
RLVNVPMPES ALRCPRCDST NTKFCYFNNY SLSQPRHFCK ACRRYWTRGG ALRNVPVGGG  180
CRRNKRSKSN ASKSQTRSDR QTTTTAPGTL GIPTTGNGGL IPPPLRFIPQ LGGNFNTAPE  240
LVGGDLLTGG ALAPLFSCSD SSLEAWRFHH APQLGFMDPS PGFQHGESPF IVSDMLQPKH  300
SEPLFSQSEP VKPEENPEMD LPRQFTGAKL LRNDHWSNAA SPWTDFPSPS TTNRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678367394
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020549341.13e-69LOW QUALITY PROTEIN: dof zinc finger protein DOF5.1-like
TrEMBLA0A2Z7D1R03e-63A0A2Z7D1R0_9LAMI; Uncharacterized protein
STRINGVIT_08s0007g00180.t015e-60(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.14e-43Dof family protein