PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678345130
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GeBP
Protein Properties Length: 371aa    MW: 41165.9 Da    PI: 6.4126
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678345130genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573109.62.1e-34154250298
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                +fqr+ws++Deiv+L+G+ d+ ++++++p+ +i+af++f+kk+++++v+k+ql +Kir+LK+Kf+++++k  +g++ +fsk+h++ +++lskkiWg+
  678345130 154 MFQRIWSQDDEIVVLRGIFDYVEEKKADPYIEITAFHDFIKKKLQVTVNKDQLRSKIRSLKQKFTNNKSKEVNGEDRVFSKPHEHLVYQLSKKIWGK 250
                79*********************************************************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.8E-30155249IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MAKNRDPQPA NEATSEEEES ETESESESDS EGDQTPALTK GRSEPLKAQP PPPPQHTNSD  60
DSESGSDSES DESSDDEVPS PPKPVADVQK PSSTKRPTAV QASSPKPSTP SSKLTGVKRA  120
VETNGLSDKD VKKSKNKSET SVDTDKANDS KRPMFQRIWS QDDEIVVLRG IFDYVEEKKA  180
DPYIEITAFH DFIKKKLQVT VNKDQLRSKI RSLKQKFTNN KSKEVNGEDR VFSKPHEHLV  240
YQLSKKIWGK GDTQISVGSP NPKVVKQAKK KEKNLPEHNS DGAKPEEVAN PVKTGTDSSA  300
VNKFRTFGAA ESMEEMIQRL GTEMFEGGKV MAGSKAWMNL KQKEMEMYLE TLQVKMDRTK  360
LVLDALKSGN L
Cis-element ? help Back to Top
SourceLink
PlantRegMap678345130
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-20DNA-binding storekeeper protein-related transcriptional regulator