PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678336358
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 274aa    MW: 30409.7 Da    PI: 9.9898
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678336358genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-082002411055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                + RR++i +++  L++l+P +    +k + Ka +L + ++YI+sLq
  678336358 200 QARREKISERMKILQDLVPGC----NKIVGKALVLDEIINYIQSLQ 241
                57*******************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.115190240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-4198246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-5200241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.14E-12201253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.45E-7202245No hitNo description
Gene3DG3DSA:4.10.280.103.0E-13203254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MDPAPLVNEP SFTTPENPSS PALGVLLSIP MSGGELGLRM GSLSAASGGV EESTVTEHSV  60
GRCVNGGGKK RRFTLNSYDD GSYKFVPTRT PANQHFERPQ VPKFRNENGD SRPEGEENHN  120
AVNEKTIPEP PKDYIHVRAR RGQATDSHSL AERTKRVQVK LNRVTGRRFR VAVGNATKNL  180
DFLSLRFLIY ILVFFFGAVQ ARREKISERM KILQDLVPGC NKIVGKALVL DEIINYIQSL  240
QHQVEFLSMK LEAVCSRFPS RDLASRMLDG NGMG
Cis-element ? help Back to Top
SourceLink
PlantRegMap678336358
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071749.12e-62transcription factor bHLH79-like isoform X2
TrEMBLA0A0H3YBS37e-71A0A0H3YBS3_SALMI; Basic helix-loop-helix transcription factor
STRINGXP_006476705.11e-59(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.11e-49bHLH family protein