PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678306774
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 230aa    MW: 25525.2 Da    PI: 8.0136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678306774genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.9e-124286755
               HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 Er RR+++++ f +L +llP+ +     +K +K++i+ ++v+Y+k+Lq
  678306774 42 WTERERRKKMKDMFTNLHSLLPHiP-----PKADKSTIVDETVKYVKKLQ 86
               57*********************88.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-153396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.6683585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-143894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.20E-123890No hitNo description
PfamPF000102.0E-94086IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.3E-94391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550215.0E-5151221No hitNo description
CDDcd048730.00137153187No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MDDTPCGVML SAAGKPMKRR PAAAKNEGGG DEESEDHEVH IWTERERRKK MKDMFTNLHS  60
LLPHIPPKAD KSTIVDETVK YVKKLQNVVE ELRLRSMVAR NASRSVVAQS GSNPNPNHDS  120
MSSFRGLDFH APAVFKTWTS ANVILSICGK EAQFSICSLK RPGLLTAICF VMEKHNIEVV  180
SAQVSSDYGP SMIAIHARVN GDIEQFQQQP SAVEQVYKQA AAEIILWVNP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678306774
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088240.13e-72transcription factor bHLH95-like isoform X2
TrEMBLA0A2G9GTZ45e-76A0A2G9GTZ4_9LAMI; Uncharacterized protein
STRINGVIT_03s0063g00170.t014e-64(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-42bHLH family protein