PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676748216 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | bZIP | ||||||||
Protein Properties | Length: 522aa MW: 56251.3 Da PI: 9.3078 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.6 | 1.9e-11 | 375 | 433 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR++A rs +RK +++eLe kv++L++e ++L +l +l+ + l++++ 676748216 375 KRVKRILANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSLGLTNQN 433 899*********************************************99888887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-19 | 371 | 435 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.703 | 373 | 436 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.18E-11 | 375 | 431 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.7E-12 | 375 | 429 | No hit | No description |
Pfam | PF00170 | 1.9E-9 | 375 | 427 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 6.17E-21 | 376 | 425 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010628 | Biological Process | positive regulation of gene expression | ||||
GO:0010629 | Biological Process | negative regulation of gene expression | ||||
GO:0090567 | Biological Process | reproductive shoot system development | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 522 aa Download sequence Send to blast |
MGGTDTSMMQ RANPSSATTS SSSSIPKLSN QHLNPALIRS QQFRQPFSGS TTAANRVGAT 60 PPPIPPISPY SQIPATLQPK HSRSLSQPSS FFSFDSLPPL NPSPPVSVSV EERNAAGFSP 120 SLPPSPFTMC HSSSRVAAAG DGENLPPRKS HRRSNSDVTF GFSSMMSQSQ KSPPLIPSKS 180 LERSVSGGEA SDWSNLVKEE PGEGFFRGRK SESEAMDDVF TAYMNLDNID VLNSFGGEDG 240 KSGNETVEEM ESSRGSGTRK TNGGSSSDSE GESSASGNVK VSSGVKRRAG GDIAPTGRHY 300 RSVSMDSCFM GKLNFGDESS LKLPPSSAKA SPTNSGEGNS SAFSVEFGNS EFTAAEMKKI 360 AADEKLAEIV MADPKRVKRI LANRVSAARS KERKTRYMAE LEHKVQTLQT EATTLSAQLT 420 HLQRDSLGLT NQNSELKFRL QAMEQQAQLR DALSEKLTEE VQRLKLVIGE PSRRQSGSSS 480 SESKTSLNPE MFQQLSISQL QHQQMQHSNQ NSSMKAKHAS NE |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00037 | PBM | Transfer from AT2G21230 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676748216 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020884100.1 | 0.0 | probable transcription factor PosF21 | ||||
Refseq | XP_020884101.1 | 0.0 | probable transcription factor PosF21 | ||||
TrEMBL | D7LL15 | 0.0 | D7LL15_ARALL; Uncharacterized protein | ||||
STRING | Bostr.5022s0114.1.p | 0.0 | (Boechera stricta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15625 | 14 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21230.1 | 0.0 | bZIP family protein |