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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
483651 |
Common Name | ARALYDRAFT_483651 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
GRAS |
Protein Properties |
Length: 624aa MW: 68335.7 Da PI: 5.5451 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
483651 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 293.8 | 4.4e-90 | 262 | 624 | 2 | 368 |
GRAS 2 velLlecAeavss..gdle......laqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+e+L+++Ae + + + ++ laq +Larl+++ s++++p+qR+a++++eAL + +++ +a pp t ++n + ++aa++ fse+sP+l+f
483651 262 IEQLFNAAELIGTtgN-NNngdhtvLAQGILARLNHHlnTSNHKSPFQRAASHIAEALLSLIHN------DASPPLIT-PENLILRIAAYRSFSETSPFLQFV 356
5678888888765431.222444469**********98788889*******************9......55555555.589********************* PP
GRAS 95 hltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLa...sRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
++taNq I e+ +++ +r+HiiDfd+++G+QW +L+q+La R++ + sl++T++++p s+ ++ el+ t+e+L+ fA e+++pfe+++l + l +
483651 357 NFTANQSIIESCNESgfDRIHIIDFDVGYGGQWSSLMQELApggRRRNRASSLKLTVFAPPPSTvsDEFELRFTEENLKTFAGEVKIPFEIELLSIELLLNPA 459
************99988************************8866779999*********9988899***************************888888889 PP
GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
++ L++++ +Ea+aVnl ++ + + +L+++k++sP+vvv++++ +d+n+++F + +++al+y+++l++sl+a+ ++++++++Er++++
483651 460 YWPLSLRSseKEAIAVNLPVNSVASG--------YLPLILRFLKQISPNVVVCSDRGCDRNDAPFPNAVIHALQYHTSLLESLDAN---QNQDDSSIERFWVQ 551
9999888777*********9666654........5677************************************************...89************ PP
GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
++i++++++++++ e+ Wr+ ++++GF+p++ls++a++qa++ll++ +++g++ve+++ slv++W++++Lv
483651 552 PSIEKLLMKRHRW----IERSPPWRSLFTQCGFSPASLSQTAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELV 624
*************....89999****************************************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 624 aa
Download sequence Send
to blast |
MPLSFERFQG EGVFGLSSSF YSDSPKIWSN QDKTEGKQDL GYVVGGLLPE PTSVLDALRS 60 PSPLASYSST TTTLSSSHGG GTTVTNTTVT AGDDNNNKCS QMGLDDLDGV LSASSPGQEQ 120 SILRLIMDPG SGFGVFDPGF GFGSGSGPVP VSENSNPLCS FPFQEIATPA EALINPTNHC 180 LFSNPPLSPP AKRFNSGSLH QPVFPFSDPD PGHDPVRRQH QFPFPFQFHH NQQQQMPSSS 240 AAVAIVPVPS PGMAGDDQSV IIEQLFNAAE LIGTTGNNNN GDHTVLAQGI LARLNHHLNT 300 SNHKSPFQRA ASHIAEALLS LIHNDASPPL ITPENLILRI AAYRSFSETS PFLQFVNFTA 360 NQSIIESCNE SGFDRIHIID FDVGYGGQWS SLMQELAPGG RRRNRASSLK LTVFAPPPST 420 VSDEFELRFT EENLKTFAGE VKIPFEIELL SIELLLNPAY WPLSLRSSEK EAIAVNLPVN 480 SVASGYLPLI LRFLKQISPN VVVCSDRGCD RNDAPFPNAV IHALQYHTSL LESLDANQNQ 540 DDSSIERFWV QPSIEKLLMK RHRWIERSPP WRSLFTQCGF SPASLSQTAE AQAECLLQRN 600 PVRGFHVEKR QSSLVMCWQR KELV
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT053760 | 0.0 | BT053760.1 Arabidopsis thaliana unknown protein (At2g45160) mRNA, complete cds. |
GenBank | CP002685 | 0.0 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |