PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462905609
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 493aa    MW: 54189.9 Da    PI: 5.7974
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462905609genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.9e-31112165255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  462905609 112 PRLRWTPDLHMAFVNAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 165
                8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.336108168IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.8E-29108166IPR009057Homeodomain-like
SuperFamilySSF466899.14E-14111166IPR009057Homeodomain-like
TIGRFAMsTIGR015578.0E-23112167IPR006447Myb domain, plants
PfamPF002498.4E-9113164IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MVTRAEQLMT GEVKDKQVLV EVLEDDEEKS MDNKALDLNE GIDVESEEGE VGDDDEEDDG  60
DDDDDGGSTT DVAGSRSSSN NSSTNKNSSD KVEGSGEQRV PSVRQYNRSK LPRLRWTPDL  120
HMAFVNAVER LGGQERATPK LVLQMMNVRG LSIAHVKSHL QMYRSKKLDQ DGRPRGSISS  180
VYSSMDFHFM RGDRRFNGMP FLQRAAALSS SRPDHGGFFA SRNGSRPEVS RLYGLLQHRQ  240
PQMQSLDFRS SSFRHHEWAM NQREELIARK DVFKPPSAGP PPXXXXPFTD TGAAVAAAGE  300
HTRINTDVNF GHSIGSNSRP LSRSLSWAMP GDRHLSFRWR PESGSNVVVG HVSSSAVIAK  360
SSDPVVIDDE APDAKQIERQ KHVEPRASVS PADDACRKRP LPEAQDSTPD LQLSLSPATA  420
VDAKKRKTTT AASEQQEIVD SSELWISLSL SPPTAASMQQ QNQPKEKTRG SSGGEAVLGQ  480
STLDLTMSIR ALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-18113167357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-18113167357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-18113167357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-18113167357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462905609
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025824409.10.0uncharacterized protein LOC112899951 isoform X1
TrEMBLA0A2S3GN020.0A0A2S3GN02_9POAL; Uncharacterized protein
STRINGSi016955m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.16e-34G2-like family protein