PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462888938
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 407aa    MW: 44475.5 Da    PI: 7.3582
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462888938genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.43.7e-1455862556
    G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56
               ++A+P +i+e m+v+g+t++hv+SHLQkYR++
  462888938 55 KEAVPNKIVEQMNVEGITRDHVASHLQKYRMH 86
               78****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.2E-134889IPR009057Homeodomain-like
SuperFamilySSF466899.5E-75289IPR009057Homeodomain-like
TIGRFAMsTIGR015575.3E-125586IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MIYPSSAHAT AAAVTTTVAA VEPVGERPER RQYFKIHNYL FIMLSANDKL ETMMKEAVPN  60
KIVEQMNVEG ITRDHVASHL QKYRMHLKQV STGTYKSRNP FTNENVLSEG NFINTDGQHG  120
RYQPSISFAC FSAASGTHNM LPTQSVQLMN QRNLVISSKD MGSVGYGGNL SQIVVPRSQH  180
GVSSFTSASN SNTNICFLSG SSGSSFTNIS NNTTFNTSNS SANIRKGRSP LAVSMEATYY  240
PYISYASLCM SDPDPSKRNK RRLNQLSSLA ALSGPNSEFQ KQVATLTRTT TPMAGFTEQV  300
APFKIGNNTN SVVMPNYNSA PGGASSVISD LPSIQTYRDA MQSQMLNVRD GSGSLLDHQV  360
VADELNYNNE SLIGTRSGQN GLGDDLDEFL TDCFDQHQDV QLDHKLQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462888938
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1872246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.12e-10G2-like family protein