PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462859189

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bHLH

Protein Properties

Length: 373aa MW: 39436 Da PI: 7.2671

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462859189	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.2e-06	205	231	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ L++l+P + 462859189 205 SHSLAERVRREKISQRMKLLQDLVPGC 231 8************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	5.46E-5	199	242	No hit	No description
SuperFamily	SSF47459	1.83E-7	199	236	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.407	201	262	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.0E-7	204	233	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence Send to blast
MMGQFHHYPQ PQVGGAGAAG LPILENLMPM GHLDQFLADP GFAERAARLS GFDGRAGGAG 60 YGGAVPGQFG IPDAGPVGAL KELELGNGRD ESSVSDPASA SAGMALKAPS DGNAKKRKAS 120 GKGKGKDGAV STSAKDLAKE ESSGKRCKSS DESNGADENS AKGKAAQSTS ENGGKKQGKD 180 STSKPPEPPK DYIHVRARRG EATDSHSLAE RVRREKISQR MKLLQDLVPG CNKFLSMKLA 240 TVNPQLDFNN LPNLLSKDMQ QSCGPLQNSH FPLETSGAPM PYINQGNPLG CSLTNGMDNQ 300 SSMQPLDPAF CRPMNSQHPF LNGVSDSTSQ VGTFWQDDLQ SVVHMDMGQS QEMATSSNSY 360 NGSLQTVHMK MEL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence Send to blast

MMGQFHHYPQ PQVGGAGAAG LPILENLMPM GHLDQFLADP GFAERAARLS GFDGRAGGAG  60
YGGAVPGQFG IPDAGPVGAL KELELGNGRD ESSVSDPASA SAGMALKAPS DGNAKKRKAS  120
GKGKGKDGAV STSAKDLAKE ESSGKRCKSS DESNGADENS AKGKAAQSTS ENGGKKQGKD  180
STSKPPEPPK DYIHVRARRG EATDSHSLAE RVRREKISQR MKLLQDLVPG CNKFLSMKLA  240
TVNPQLDFNN LPNLLSKDMQ QSCGPLQNSH FPLETSGAPM PYINQGNPLG CSLTNGMDNQ  300
SSMQPLDPAF CRPMNSQHPF LNGVSDSTSQ VGTFWQDDLQ SVVHMDMGQS QEMATSSNSY  360
NGSLQTVHMK MEL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462859189

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004971039.1	0.0	transcription factor bHLH77
TrEMBL	A0A0A9KLQ9	0.0	A0A0A9KLQ9_ARUDO; Uncharacterized protein
STRING	Si001242m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP919	38	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	5e-43	bHLH family protein