PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 332869 | ||||||||
Common Name | ARALYDRAFT_332869 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | ERF | ||||||||
Protein Properties | Length: 147aa MW: 16119.2 Da PI: 8.9398 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 87 | 137 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++kGVr ++ +g+W AeI+dp + +r +lg+f tae+Aa a+++a+ +l g 332869 87 KKHKGVRKKP-SGKWSAEIWDP-----SmrARRWLGTFPTAEMAAHAYDEAAAELVG 137 589****999.7*********9.....335**********************99977 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.7E-22 | 88 | 140 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.9E-23 | 88 | 146 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.442 | 88 | 146 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.24E-15 | 88 | 139 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.3E-10 | 88 | 137 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-6 | 89 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.85E-15 | 91 | 123 | No hit | No description |
PRINTS | PR00367 | 1.1E-6 | 111 | 127 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MDYSKNVQNE NFTLVSQPSY LTRDQEHGIM VSTLRQVISN TGGDTSSSHW IASEALPPPD 60 AGPCPLCGVT GCYGCAFPRH EEVKKEKKHK GVRKKPSGKW SAEIWDPSMR ARRWLGTFPT 120 AEMAAHAYDE AAAELVGKRS ARRGTN* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 332869 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB026640 | 4e-99 | AB026640.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10. | |||
GenBank | CP002688 | 4e-99 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002865034.1 | 1e-108 | putative ethylene-responsive transcription factor ERF121 | ||||
Swissprot | Q9FGC9 | 3e-83 | EF121_ARATH; Putative ethylene-responsive transcription factor ERF121 | ||||
TrEMBL | D7MLD0 | 1e-106 | D7MLD0_ARALL; Uncharacterized protein | ||||
STRING | fgenesh1_pm.C_scaffold_8002212 | 1e-107 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3472 | 15 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67010.1 | 5e-68 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | 332869 |
Entrez Gene | 9301109 |