PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Oryza sativa subsp. japonica
C3H FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------- LOC_Os02g10080.1/266-291 (1) | |------------------------------------------------------------------- LOC_Os06g41384.1/260-285 (18) | |------------------------------------------------------------------- LOC_Os04g57010.1/276-301 (53) | | /----------- LOC_Os01g07930.1/57-82 (44) |---------------------------74--------------------------+ | \----------- LOC_Os07g04650.1/440-466 (72) | | /-------------------------------------------------------- LOC_Os08g06330.1/246-271 (2) | | | | /--------------------------------------------- LOC_Os01g68860.1/174-198 (3) | | | | | |--------------------------------------------- LOC_Os04g02730.1/115-127 (4) | | | | | | /----------- LOC_Os10g25220.1/683-700 (5) | | |----------------77---------------+ | | | \----------- LOC_Os02g19804.1/188-213 (60) | | | | | | /---------------------- LOC_Os11g28270.1/356-382 (7) | | | | | | | |---------------------- LOC_Os12g18120.1/479-504 (32) | | | | | | | | /----------- LOC_Os01g15350.1/348-372 (56) | | |----------64----------+----95----+ | | | | \----------- LOC_Os01g15460.1/357-380 (78) | | | | | | | |---------------------- LOC_Os01g68860.1/379-404 (65) | | | | | | | \---------------------- LOC_Os12g21700.1/365-391 (79) | | | | | |--------------------------------------------- LOC_Os01g42970.1/372-393 (9) | | | | | |--------------------------------------------- LOC_Os01g15460.1/156-180 (11) | | | | | | /----------- LOC_Os01g15350.1/52-78 (13) | | |----------------99---------------+ | | | \----------- LOC_Os01g15460.1/60-86 (81) | | | | | |--------------------------------------------- LOC_Os01g42970.1/427-449 (14) | | | | | | /----------- LOC_Os11g28270.1/104-128 (16) | | | | | | |----------------66---------------+----------- LOC_Os01g68860.1/127-152 (31) | | | | | | | \----------- LOC_Os12g21700.1/114-138 (86) | | | | | | /----------- LOC_Os04g35800.1/317-339 (17) | | |----------------86---------------+ | | | \----------- LOC_Os04g35800.1/283-306 (95) + | | | | | /----------- LOC_Os06g32860.1/158-183 (20) | | |---------------100---------------+ | | | \----------- LOC_Os06g32720.1/187-212 (30) | | | | | | /----------- LOC_Os06g32860.1/45-70 (22) | | | /----85----+ | | | | \----------- LOC_Os06g32720.1/80-105 (77) | | | | | | | |---------------------- LOC_Os12g18120.1/109-134 (62) | | |----------94----------+ | | | |---------------------- LOC_Os06g32860.1/91-117 (63) | | | | | | | \---------------------- LOC_Os06g32720.1/125-147 (97) | |----51----+ | | |--------------------------------------------- LOC_Os01g42970.1/289-314 (24) | | | | | |--------------------------------------------- LOC_Os01g15350.1/300-326 (26) | | | | | |--------------------------------------------- LOC_Os01g15460.1/111-135 (33) | | | | | |--------------------------------------------- LOC_Os06g46400.1/117-137 (34) | | | | | |--------------------------------------------- LOC_Os01g15350.1/147-172 (35) | | | | | |--------------------------------------------- LOC_Os03g02160.3/812-832 (36) | | | | | | /----------- LOC_Os11g28270.1/150-174 (42) | | |----------------90---------------+ | | | \----------- LOC_Os12g21700.1/160-184 (83) | | | | | | /---------------------- LOC_Os01g68860.1/334-359 (43) | | | | | | | /----89----+ /----------- LOC_Os11g28270.1/311-336 (74) | | | | \----95----+ | | |-----51----+ \----------- LOC_Os12g21700.1/320-345 (89) | | | | | | | \--------------------------------- LOC_Os01g15460.1/308-334 (80) | | | | | |--------------------------------------------- LOC_Os01g14870.1/69-90 (45) | | | | | |--------------------------------------------- LOC_Os12g03554.1/219-240 (47) | | | | | |--------------------------------------------- LOC_Os01g15350.1/102-128 (48) | | | | | |--------------------------------------------- LOC_Os01g42970.1/158-183 (50) | | | | | |--------------------------------------------- LOC_Os12g18120.1/287-311 (52) | | | | | |--------------------------------------------- LOC_Os11g28270.1/59-82 (55) \----63----+ | | |--------------------------------------------- LOC_Os01g68860.1/82-107 (61) | | | |--------------------------------------------- LOC_Os01g42970.1/107-132 (69) | | | |--------------------------------------------- LOC_Os05g41790.1/123-143 (73) | | | |--------------------------------------------- LOC_Os12g18120.1/434-460 (82) | | | |--------------------------------------------- LOC_Os06g49080.1/5-26 (84) | | | |--------------------------------------------- LOC_Os12g18120.1/240-262 (85) | | | |--------------------------------------------- LOC_Os06g21390.1/35-55 (88) | | | |--------------------------------------------- LOC_Os12g21700.1/69-93 (92) | | | \--------------------------------------------- LOC_Os01g42970.1/212-236 (93) | | /----------- LOC_Os06g41384.1/100-125 (6) | /----53----+ | | \----------- LOC_Os02g10080.1/101-126 (68) |----------------98---------------+ | \---------------------- LOC_Os04g57010.1/105-130 (21) | | /----------- LOC_Os06g46890.1/14-37 (8) |---------------------99---------------------+ | \----------- LOC_Os02g06584.2/11-34 (10) | | /----------- LOC_Os01g45730.1/259-284 (12) | /----83----+ | | \----------- LOC_Os05g50080.1/269-294 (54) |----------------53---------------+ | \---------------------- LOC_Os03g18950.1/384-407 (70) | |-------------------------------------------------------- LOC_Os08g06330.1/88-113 (15) | | /---------------------- LOC_Os01g39100.1/488-509 (19) | | | | /----------- LOC_Os04g57600.1/116-138 (28) |----------------63---------------+----88----+ | | \----------- LOC_Os02g58440.1/113-134 (67) | | | \---------------------- LOC_Os06g21390.1/4-27 (39) | | /----------- LOC_Os05g10670.1/184-204 (23) | | |---------------------52---------------------+----------- LOC_Os04g41060.1/117-136 (64) | | | \----------- LOC_Os01g09620.1/121-141 (66) | | /----------- LOC_Os09g13530.1/37-61 (25) |---------------------99---------------------+ | \----------- LOC_Os07g04580.1/324-347 (37) | | /----------- LOC_Os08g38370.1/555-577 (27) | /----------90---------+ | | \----------- LOC_Os02g45480.1/112-133 (38) | | | /-----89----+ /---------------------- LOC_Os03g18950.1/420-446 (40) | | | | | | \----77----+ /----------- LOC_Os05g50080.1/307-332 (46) | | \----100---+ |----55----+ \----------- LOC_Os01g45730.1/297-322 (91) | | | | /----------- LOC_Os06g41384.1/34-58 (57) | \----------------78---------------+ | \----------- LOC_Os08g06330.1/170-195 (59) | | /----------- LOC_Os03g49170.1/326-346 (29) | /----70----+ | | \----------- LOC_Os12g33090.1/218-239 (51) |----------------56---------------+ | \---------------------- LOC_Os05g03760.1/257-278 (94) | |-------------------------------------------------------- LOC_Os04g01480.1/52-83 (41) | |-------------------------------------------------------- LOC_Os07g38090.1/278-300 (49) | |-------------------------------------------------------- LOC_Os08g04170.1/319-339 (58) | |-------------------------------------------------------- LOC_Os07g04650.1/379-405 (71) | |-------------------------------------------------------- LOC_Os06g21390.1/151-172 (75) | | /----------- LOC_Os05g45020.1/101-126 (76) |---------------------99---------------------+ | \----------- LOC_Os01g53650.1/87-112 (96) | |-------------------------------------------------------- LOC_Os08g38370.1/517-543 (87) | \-------------------------------------------------------- LOC_Os01g39100.1/460-482 (90) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------- LOC_Os06g46890.1 (1) | |------------------------------------------------------------------- LOC_Os02g06584.2 (33) | | /-------- LOC_Os02g58440.1 (2) | /---------------100---------------+ | | \-------- LOC_Os04g57600.1 (19) | | | | /-------- LOC_Os04g57010.1 (3) | | /---100--+ | | | \-------- LOC_Os02g10080.1 (26) | | /--100--+ | | | \----------------- LOC_Os06g41384.1 (10) | |-------88-------+ | | \------------------------- LOC_Os08g06330.1 (18) | | | | /-------- LOC_Os05g10670.1 (4) | | /---100--+ | | | \-------- LOC_Os01g09620.1 (34) | | /-------91------+ | | | | /-------- LOC_Os05g45020.1 (38) | | | \---95---+ | | | \-------- LOC_Os01g53650.1 (47) | | | | |---91---+ /----------------- LOC_Os12g33090.1 (17) | | | | | | | /--100--+ /-------- LOC_Os03g49170.1 (21) | | | | \---100--+ | | \--100--+ \-------- LOC_Os07g38090.1 (31) | | | | | \------------------------- LOC_Os05g03760.1 (23) | | | | /------------------------- LOC_Os01g14870.1 (5) | | | | | | /-------- LOC_Os01g15460.1 (6) | | |-------97-------+ | | | \-------- LOC_Os01g15350.1 (27) | | | | | |------------------------- LOC_Os01g42970.1 (7) | | | | | |------------------------- LOC_Os10g25220.1 (8) | |-------50-------+ + | | /-------- LOC_Os12g21700.1 (11) | | | /---100--+ | | | | \-------- LOC_Os11g28270.1 (25) | | |---99--+ | | | \----------------- LOC_Os01g68860.1 (37) | | | | | | /----------------- LOC_Os12g18120.1 (14) | /---52--+ | | | | | \---99--+ /-------- LOC_Os06g32860.1 (16) | | | \---100--+ | | | \-------- LOC_Os06g32720.1 (49) | | | | | | /-------- LOC_Os05g41790.1 (12) | | |----------------92---------------+ | | | \-------- LOC_Os12g03554.1 (32) | | | | | | /----------------- LOC_Os03g18950.1 (13) | | | | | | |-----------91-----------+ /-------- LOC_Os05g50080.1 (28) | | | \---98---+ | | | \-------- LOC_Os01g45730.1 (44) | | | | | | /-------- LOC_Os07g04580.1 (15) | | |----------------59---------------+ | | | \-------- LOC_Os07g04650.1 (22) | | | | | |------------------------------------------ LOC_Os02g45480.1 (20) | | | | | |------------------------------------------ LOC_Os04g35800.1 (24) | | | | /---80---+ |------------------------------------------ LOC_Os03g02160.3 (29) | | | | | | | |------------------------------------------ LOC_Os08g38370.1 (30) | | | | | | | |------------------------------------------ LOC_Os01g07930.1 (35) | | | | | | | |------------------------------------------ LOC_Os06g49080.1 (39) | | | | | | | |------------------------------------------ LOC_Os01g39100.1 (40) | | | | | | | |------------------------------------------ LOC_Os04g41060.1 (41) | | | | \--100--+ | |------------------------------------------ LOC_Os08g04170.1 (42) | | | | | |------------------------------------------ LOC_Os02g19804.1 (43) | | | | | |------------------------------------------ LOC_Os04g02730.1 (45) | | | | | |------------------------------------------ LOC_Os06g21390.1 (46) | | | | | \------------------------------------------ LOC_Os06g46400.1 (48) | | | \-------------------------------------------------- LOC_Os04g01480.1 (36) | \----------------------------------------------------------- LOC_Os09g13530.1 (9) |