PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Coffea canephora
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/------------------------------------------------------------------- Cc10_g02270/39-88 (1) | |------------------------------------------------------------------- Cc09_g03140/55-104 (58) | | /------------------------ Cc05_g14220/33-81 (2) | | | | /------ Cc10_g06180/59-105 (16) | | /--67-+ | | | \------ Cc03_g02110/50-98 (21) | | | | | /--87-+------------ Cc11_g14890/49-99 (48) | /--------50--------+ | | | | |--93-+ \------------ Cc07_g16000/27-77 (59) | | | | | | | \------------------ Cc11_g15790/50-99 (34) | | | | | |------------------------ Cc01_g18710/34-84 (25) | | | | | \------------------------ Cc02_g13680/8-58 (42) | | | | /------ Cc08_g11920/234-284 (3) | | /-----------84----------+ | | | \------ Cc02_g04730/160-210 (49) | | | | | | /------ Cc03_g05410/152-201 (4) | | | /--85-+ | | | | \------ Cc01_g18390/133-184 (82) | | | /--51-+ | | | | | /------ Cc07_g13100/85-135 (28) | |-----89-----+ | \-100-+ | | | /--99-+ \------ Cc07_g13110/56-106 (60) | | | | | | | | | \------------------ Cc02_g09010/91-141 (18) | | | | | | | |------------------------ Cc02_g14250/127-177 (14) | | | | | | | |------------------------ Cc02_g14240/60-111 (15) | | \--80-+ | | | /------ Cc01_g18400/13-64 (19) | | |--------93-------+ | | | \------ Cc03_g05400/25-76 (77) | | | | | | /------ Cc02_g04740/119-169 (36) | | | | | | \--------84-------+------ Cc08_g11910/88-139 (56) | | | | | \------ Cc02_g25060/102-154 (63) | | | | /------ Cc04_g04880/7-55 (5) | | /--98-+ | | | \------ Cc08_g00110/7-55 (75) | | /--63-+ | | | \------------ Cc08_g00740/6-55 (23) | | /--51-+ | | | \------------------ Cc04_g04250/5-53 (38) | | /-100-+ | | | \------------------------ Cc06_g08440/5-53 (52) | | | | | | /------ Cc01_g00840/24-73 (32) | | /--76--+ /--57-+ | | | | | \------ Cc06_g23190/35-84 (74) | | | | /--51-+ | | | | | \------------ Cc07_g03670/53-102 (46) | | | \----100----+ | |--77-+ \------------------ Cc04_g07770/60-108 (54) | | | | | | /------------------ Cc01_g03550/795-845 (10) | | | | | | | |------------------ Cc01_g15370/119-169 (37) | | \--------86--------+ | | | /------------ Cc02_g38950/92-140 (45) | | | | | | \--82-+ /------ Cc08_g15690/154-204 (62) | | \--74-+ | | \------ Cc02_g01940/132-181 (73) | | | | /------ Cc06_g10260/84-134 (7) + | | | | /-----51----+------ Cc08_g09520/71-120 (40) | | | | | | | \------ Cc04_g02760/62-112 (64) | | | | | | /------ Cc02_g03430/65-115 (8) | | | /--60-+ | /--78-+ | | \------ Cc08_g13960/56-109 (20) | | | |--92-+ | | | | \------------ Cc01_g09680/141-190 (72) | | | /--62-+ | | | | | /------ Cc08_g13970/21-68 (11) | | | | | /--99-+ | | | | | | \------ Cc02_g03420/72-121 (27) | | | | |-100-+ | | | | | \------------ Cc06_g05340/69-118 (35) | | | /--70-+ | | | | | | |------------------ Cc08_g12160/46-96 (53) | | | | | | | | | | | \------------------ Cc02_g24810/108-158 (76) | | | | | | | | | \------------------------ Cc02_g39490/103-153 (79) | | | | | | |-----100----+ /------ Cc08_g07780/24-73 (26) | | | | /-100-+ | | | | | \------ Cc06_g12520/35-84 (61) | | | | /--84-+ | | | | | \------------ Cc10_g10960/40-90 (78) | | | | | | | | | | /------ Cc07_g06220/20-68 (43) | | | \-----61----+----100----+ | | | | \------ Cc10_g04710/24-73 (51) | | | | | | | \------------------ Cc10_g09120/17-66 (67) | | | | | | /------ Cc08_g04470/124-173 (9) | | | /--96-+ | | | | \------ Cc04_g00840/131-180 (68) | | | /-100-+ | | | | \------------ Cc01_g21090/87-135 (69) | | |-----------100----------+ | | | \------------------ Cc03_g01450/75-124 (80) | | | | | | /------ Cc04_g05860/54-103 (12) | /--89-+ | /--99-+ | | | | | \------ Cc11_g15010/36-85 (50) | | | |--------------96--------------+ | | | | | /------ Cc10_g15100/110-159 (47) | | | | \--86-+ | | | | \------ Cc07_g16730/181-230 (55) | | | | | | | | /------ Cc07_g07390/63-114 (17) | | | | /-100-+ | | | | | \------ Cc10_g07690/61-112 (84) | | | | /-100-+ | | | | | \------------ Cc01_g16690/104-147 (65) | | | | | | | | | | /------ Cc03_g07870/252-300 (22) | | | |-----------72-----------+ /--85-+ | | | | | | \------ Cc08_g15980/108-158 (66) | | | | | | | | | | | | /------ Cc07_g15390/193-243 (24) | | | | \--70-+--70-+ | | | | | \------ Cc10_g07460/123-172 (81) | /--51-+ | | | | | | | | \------------ Cc05_g06840/249-299 (29) | | | | | | | | | | /------------ Cc07_g20810/38-84 (30) | | | | | | | | | | |--------------100-------------+ /------ Cc00_g07520/66-113 (33) | | | | | \--74-+ | | | | | \------ Cc00_g07530/115-162 (57) | | | | | | | | | | /------ Cc11_g10210/122-171 (41) | | | | |-----------------55-----------------+ | | | | | \------ Cc05_g13430/74-121 (70) \--62-+ | | | | | | |------------------------------------------- Cc02_g13700/19-69 (44) | | | | | | | \------------------------------------------- Cc05_g07590/24-73 (71) | | | | | \------------------------------------------------- Cc02_g06230/75-124 (13) | | | \------------------------------------------------------- Cc06_g16660/29-78 (31) | | /------ Cc06_g00780/86-144 (6) | | \--------------------------100-------------------------+------ Cc02_g05970/80-130 (39) | \------ Cc10_g14150/81-129 (83) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------- Cc08_g04470 (1) | |------------------------------------------------------------------- Cc04_g00840 (48) | | /------ Cc03_g05400 (2) | /--------99-------+ | | \------ Cc01_g18400 (8) | | | | /------ Cc02_g09010 (11) | /--------66--------+ /-100-+ | | | | \------ Cc03_g05410 (38) | | | /--97-+ | | | | \------------ Cc01_g18390 (83) | | \-100-+ | | | /------ Cc07_g13100 (77) | | \----100----+ | | \------ Cc07_g13110 (82) | | | | /------------ Cc05_g14220 (4) | | | | | /--99-+ /------ Cc05_g07590 (37) | | | \-100-+ | | | \------ Cc02_g13700 (67) | |-----------91-----------+ | | | /------ Cc01_g18710 (41) | | \-----84----+ | | \------ Cc02_g13680 (69) | | | | /------------ Cc08_g00740 (5) | | | | | /--99-+ /------ Cc04_g04250 (19) | | | \--97-+ | | | \------ Cc06_g08440 (23) | |-----------100----------+ | | | /------ Cc08_g00110 (53) | | \----100----+ | | \------ Cc04_g04880 (61) | | | | /------ Cc09_g03140 (7) | | /--95-+ | | | \------ Cc10_g02270 (18) | | /--93-+ | | | \------------ Cc06_g00780 (52) | | /-100-+ | | | | /------ Cc02_g05970 (24) | | | \----100----+ | |--------100-------+ \------ Cc10_g14150 (74) | | | | | \------------------------ Cc06_g16660 (20) | | | | /------ Cc06_g10260 (9) | | /-100-+ | | | \------ Cc08_g09520 (43) | | /-100-+ | | | \------------ Cc04_g02760 (59) | | /--99-+ | | | | /------ Cc02_g24810 (60) | | | \-----96----+ | | /--51-+ \------ Cc08_g12160 (71) | | | | | | | \------------------------ Cc02_g39490 (78) | | | | | | /------ Cc02_g03430 (16) | | /--57--+ /-100-+ | | | | | \------ Cc08_g13960 (26) | | | | /-100-+ | | | | | \------------ Cc01_g09680 (79) | | | | | | | | \-----59----+ /------ Cc08_g13970 (30) | | | | /-100-+ | | | | | \------ Cc02_g03420 (55) | | | \-100-+ | | | \------------ Cc06_g05340 (46) | |--62-+ | | | /------ Cc10_g09120 (27) | | | /--52-+ | | | | \------ Cc10_g10960 (40) | | |-----------55-----------+ + | | | /------ Cc06_g12520 (45) | | | \--94-+ | | | \------ Cc08_g07780 (54) | | | | /--70-+ | /------ Cc10_g04710 (31) | | | \--------------100-------------+ | | | \------ Cc07_g06220 (49) | | | | | | /------ Cc02_g04730 (10) | | |-----------------100----------------+ | | | \------ Cc08_g11920 (65) | | | | | | /------ Cc07_g16000 (12) | | | /--95-+ | | | | \------ Cc11_g14890 (22) | | |--------------74--------------+ | | | | /------ Cc10_g06180 (44) | | | \--79-+ | | | \------ Cc03_g02110 (63) | | | | | | /------ Cc00_g07520 (13) | | | | | | |-----------------100----------------+------ Cc07_g20810 (50) | | | | | | | \------ Cc00_g07530 (56) | | | | | | /------ Cc08_g11910 (14) | | | /--59-+ | | | | \------ Cc02_g04740 (64) | | | /--61-+ | | | | \------------ Cc02_g25060 (21) | | | /--92-+ | | | | \------------------ Cc02_g14240 (80) | | |--------61--------+ | | | \------------------------ Cc02_g14250 (39) | | | | | | /------------ Cc07_g03670 (17) | | | | | | |--------------88--------------+ /------ Cc01_g00840 (25) | | | \--95-+ | | | \------ Cc06_g23190 (62) | | | | | | /------ Cc11_g10210 (28) | /-100-+ | /-------100-------+ | | | | | \------ Cc05_g13430 (32) | | | | | | | | | | /------ Cc02_g01940 (33) | | | |--------87--------+ /--88-+ | | | | | | \------ Cc08_g15690 (68) | | | | | /--93-+ | | | | | | \------------ Cc02_g38950 (73) | | | | \--53-+ | | | | \------------------ Cc01_g15370 (81) | | | | | | | |------------------------------------------- Cc01_g16690 (29) | | | | | | | |------------------------------------------- Cc11_g15790 (35) | | | | | | | | /------ Cc08_g15980 (36) | | | | /--97-+ | | | | | \------ Cc03_g07870 (51) | | | | /--50-+ | | | | | \------------ Cc07_g15390 (72) | | | | /--94-+ | | | | | \------------------ Cc10_g07460 (70) | /--50-+ | |--------76--------+ | | | | | \------------------------ Cc05_g06840 (66) | | | | | | | | | |------------------------------------------- Cc04_g07770 (42) | | | | | | | | | | /------ Cc10_g07690 (47) | | | | |-----------------100----------------+ | | | | | \------ Cc07_g07390 (84) | | | | | | | | | |------------------------------------------- Cc02_g06230 (58) | | | | | | | | | \------------------------------------------- Cc01_g03550 (75) \-100-+ | | | | | /------ Cc10_g15100 (6) | | | /-100-+ | | | | \------ Cc07_g16730 (76) | | \-----------------76-----------------+ | | | /------ Cc04_g05860 (34) | | \--77-+ | | \------ Cc11_g15010 (57) | | | \------------------------------------------------------- Cc03_g01450 (15) | \------------------------------------------------------------- Cc01_g21090 (3) |